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Vibrio mimicus VM573, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05716676.1 VMD_17220 conserved hypothetical protein 927 1328 1
CDS hemH ZP_05716677.1 VMD_17230 phosphoribosylaminoimidazole-succinocarboxamide synthase 1478 2584 1
CDS - ZP_05716678.1 VMD_17240 conserved hypothetical protein 2704 3078 -1
CDS sfcA ZP_05716679.1 VMD_17250 malate oxidoreductase 3469 5235 1
CDS - ZP_05716680.1 VMD_17260 conserved hypothetical protein 5277 5606 1
CDS sanA ZP_05716681.1 VMD_17270 Protein sanA 5579 6340 1
CDS - ZP_05716682.1 VMD_17280 GGDEF family protein 6350 7672 -1
CDS - ZP_05716683.1 VMD_17290 aminotransferasee, class V 7945 9192 -1
CDS - ZP_05716684.1 VMD_17300 conserved hypothetical protein 9176 9835 -1
CDS trxB ZP_05716685.1 VMD_17310 thioredoxin reductase 10297 11253 1
CDS cydD ZP_05716686.1 VMD_17320 transport ATP-binding protein CydD 11285 13159 1
CDS cydC ZP_05716687.1 VMD_17330 transport ATP-binding protein CydC 13152 14873 1
CDS - ZP_05716688.1 VMD_17340 pseudouridine synthase family 1 protein 15009 15968 -1
CDS - ZP_05716689.1 VMD_17350 conserved hypothetical protein 16101 16721 -1
CDS - ZP_05716690.1 VMD_17360 conserved hypothetical protein 16724 17596 -1
CDS trpE ZP_05716691.1 VMD_17370 anthranilate synthase component I 17934 19505 1
CDS trpG ZP_05716692.1 VMD_17380 anthranilate synthase component II 19502 20113 1
CDS trpD ZP_05716693.1 VMD_17390 Anthranilate phosphoribosyltransferase 20134 21132 1
CDS - ZP_05716694.1 VMD_17400 indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 21138 22547 1
CDS trpB ZP_05716695.1 VMD_17410 tryptophan synthase subunit beta 22588 23778 1
CDS trpA ZP_05716696.1 VMD_17420 tryptophan synthase, alpha subunit 23778 24584 1
CDS gltP ZP_05716697.1 VMD_17430 proton/glutamate symporter 24602 26158 1
CDS - ZP_05716698.1 VMD_17440 thymidine kinase 26260 26808 -1
CDS aspS ZP_05716699.1 VMD_17450 aspartyl-tRNA synthetase 27098 28873 -1
CDS - ZP_05716700.1 VMD_17460 conserved hypothetical protein 29165 30034 1
CDS - ZP_05716701.1 VMD_17470 conserved hypothetical protein 30173 30901 1
CDS - ZP_05716702.1 VMD_17480 conserved hypothetical protein 31033 32004 1
CDS - ZP_05716703.1 VMD_17490 conserved hypothetical protein 32124 32861 1
CDS - ZP_05716704.1 VMD_17500 membrane protein, putative 32867 34378 1
CDS - ZP_05716705.1 VMD_17510 conserved hypothetical protein 34378 35364 1
CDS serC ZP_05716706.1 VMD_17520 phosphoserine aminotransferasee 35452 36546 -1
CDS - ZP_05716707.1 VMD_17530 conserved hypothetical protein 36668 37933 -1
CDS - ZP_05716708.1 VMD_17540 sensor histidine kinase 38156 40105 1
CDS - ZP_05716709.1 VMD_17550 conserved hypothetical protein 40102 40599 1
CDS - ZP_05716710.1 VMD_17560 conserved hypothetical protein 40790 41344 1
CDS - ZP_05716711.1 VMD_17570 Protein sxy 41414 42091 -1
CDS - ZP_05716712.1 VMD_17580 conserved hypothetical protein 42382 43302 1
CDS - ZP_05716713.1 VMD_17590 conserved hypothetical protein 43568 44227 1
CDS - ZP_05716714.1 VMD_17600 conserved hypothetical protein 44446 44955 1
CDS - ZP_05716715.1 VMD_17610 glutamate decarboxylase, putative 45065 46711 1
CDS - ZP_05716716.1 VMD_17620 conserved hypothetical protein 46953 47873 1
CDS - ZP_05716717.1 VMD_17630 iron-containing alcohol dehydrogenase 47947 49221 -1
CDS grxA ZP_05716718.1 VMD_17640 Glutaredoxin 49502 49765 1
CDS - ZP_05716719.1 VMD_17650 conserved hypothetical protein 49973 51649 1
CDS clpA ZP_05716720.1 VMD_17660 ATP-dependent Clp protease, ATP-binding subunit ClpA 51753 54020 -1
CDS clpS ZP_05716721.1 VMD_17670 ATP-dependent Clp protease adaptor protein ClpS 54060 54380 -1
CDS cspD ZP_05716722.1 VMD_17680 cold shock-like protein CspD 54853 55074 1
CDS - ZP_05716723.1 VMD_17690 isocitrate dehydrogenase, NADP-dependent, monomeric type 55176 56870 -1
CDS - ZP_05716724.1 VMD_17700 Isocitrate dehydrogenase [NADP] 2 56935 57402 -1
CDS - ZP_05716725.1 VMD_17710 pseudouridine synthase family 1 protein 57610 58452 1
CDS hisI ZP_05716726.1 VMD_17720 phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein 58509 59141 -1
CDS hisF ZP_05716727.1 VMD_17730 imidazole glycerol phosphate synthase subunit HisF 59138 59911 -1
CDS hisA ZP_05716728.1 VMD_17740 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 59893 60630 -1
CDS hisH ZP_05716729.1 VMD_17750 imidazole glycerol phosphate synthase subunit HisH 60673 61284 -1
CDS hisB ZP_05716730.1 VMD_17760 imidazoleglycerol-phosphate dehydratase/histidinol-phosphatase 61284 62357 -1
CDS hisC ZP_05716731.1 VMD_17770 histidinol-phosphate aminotransferasee 62409 63449 -1
CDS hisD ZP_05716732.1 VMD_17780 histidinol dehydrogenase 63453 64748 -1
CDS hisG ZP_05716733.1 VMD_17790 ATP phosphoribosyltransferase 64753 65649 -1
CDS - ZP_05716734.1 VMD_17800 conserved hypothetical protein 66027 67628 -1
CDS vicH ZP_05716735.1 VMD_17810 DNA-binding protein H-NS 68326 68733 1
CDS - ZP_05716736.1 VMD_17820 inosine-guanosine kinase 68785 70089 -1
CDS trmU ZP_05716737.1 VMD_17830 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 70354 71469 1
CDS - ZP_05716738.1 VMD_17840 conserved hypothetical protein 71492 72109 1
CDS purB ZP_05716739.1 VMD_17850 adenylosuccinate lyase 72167 73537 1
CDS - ZP_05716740.1 VMD_17860 putative lipoprotein 73742 74269 -1
CDS - ZP_05716741.1 VMD_17870 conserved hypothetical protein 74266 74796 -1
CDS - ZP_05716742.1 VMD_17880 conserved hypothetical protein 74765 75307 -1
CDS - ZP_05716743.1 VMD_17890 cyclopropane-fatty-acyl-phospholipid synthase 75307 76548 -1
CDS - ZP_05716744.1 VMD_17900 conserved hypothetical protein 76538 77347 -1
CDS - ZP_05716745.1 VMD_17910 conserved hypothetical protein 77347 78624 -1
CDS - ZP_05716746.1 VMD_17920 oxidoreductase, short-chain dehydrogenase/reductase family 78635 79363 -1
CDS - ZP_05716747.1 VMD_17930 transcriptional regulator, putative 79360 79779 -1
CDS htpX ZP_05716748.1 VMD_17940 Probable protease htpX 80078 80941 -1
CDS bioD ZP_05716749.1 VMD_17950 dithiobiotin synthetase 81518 82213 -1
CDS bioC ZP_05716750.1 VMD_17960 biotin synthesis protein BioC 82210 83013 -1
CDS bioF ZP_05716751.1 VMD_17970 8-amino-7-oxononanoate synthase 83010 84164 -1
CDS bioB ZP_05716752.1 VMD_17980 Biotin synthase 84148 85200 -1
CDS bioA ZP_05716753.1 VMD_17990 adenosylmethionine--8-amino-7-oxononanoate transaminase 85327 86613 1
CDS serS ZP_05716754.1 VMD_18000 seryl-tRNA synthetase 86721 88028 -1
CDS - ZP_05716755.1 VMD_18010 conserved hypothetical protein 88132 89481 -1
CDS lolA ZP_05716756.1 VMD_18020 outer-membrane lipoprotein carrier protein precursor 89506 90102 -1
CDS - ZP_05716757.1 VMD_18030 SecA, C-motif domain protein 90198 90818 -1
CDS dusC ZP_05716758.1 VMD_18040 tRNA-dihydrouridine synthase C 90987 91967 1
CDS - ZP_05716759.1 VMD_18050 GGDEF family protein 91964 93097 -1
CDS - ZP_05716760.1 VMD_18060 GGDEF family protein 93091 93432 -1
CDS - ZP_05716761.1 VMD_18070 ABC transporter, ATP-binding protein 93598 94392 -1
CDS - ZP_05716762.1 VMD_18080 ABC transporter, permease protein, putative 94389 95333 -1
CDS - ZP_05716763.1 VMD_18090 conserved hypothetical protein 95447 96412 -1
CDS - ZP_05716764.1 VMD_18100 conserved hypothetical protein 96841 97251 1
CDS - ZP_05716765.1 VMD_18110 conserved hypothetical protein 97367 97819 -1
CDS - ZP_05716766.1 VMD_18120 acetate/propionate kinase 98168 99364 1
CDS - ZP_05716767.1 VMD_18130 phosphate acetyltransferase 99500 101644 1
CDS - ZP_05716768.1 VMD_18140 conserved hypothetical protein 101729 102676 -1
CDS oppE ZP_05716769.1 VMD_18150 oligopeptide ABC transporter, ATP-binding protein 102826 103818 -1
CDS oppD ZP_05716770.1 VMD_18160 oligopeptide transporter ATP-binding component 103815 104789 -1
CDS oppC ZP_05716771.1 VMD_18170 oligopeptide ABC transporter, permease protein 104814 105716 -1
CDS oppB ZP_05716772.1 VMD_18180 oligopeptide permease ABC transporter membrane component 105730 106650 -1
CDS oppA ZP_05716773.1 VMD_18190 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein 106745 108376 -1
CDS phnD ZP_05716774.1 VMD_18200 Phosphonates-binding periplasmic protein 109000 109812 1
CDS - ZP_05716775.1 VMD_18210 sensor histidine kinase 109816 111423 1