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Vibrio mimicus VM603, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05718848.1 VMB_01490 hypothetical protein 284 1063 -1
CDS - ZP_05718849.1 VMB_01500 hypothetical protein 1116 1337 -1
CDS - ZP_05718850.1 VMB_01510 hypothetical protein 1527 1985 1
CDS - ZP_05718851.1 VMB_01520 transcriptional regulator 2040 2915 -1
CDS - ZP_05718852.1 VMB_01530 Peptidase M, neutral zinc metallopeptidase, zinc-binding site 3207 6269 -1
CDS - ZP_05718853.1 VMB_01540 polyhydroxyalkanoic acid synthase 6476 8251 -1
CDS - ZP_05718854.1 VMB_01550 conserved hypothetical protein 8309 8656 -1
CDS - ZP_05718855.1 VMB_01560 acetyl-CoA acetyltransferase 8686 9891 -1
CDS fabG ZP_05718856.1 VMB_01570 acetoacetyl-CoA reductase 9906 10646 -1
CDS - ZP_05718857.1 VMB_01580 N,N'-diacetylchitobiase 11298 14075 -1
CDS - ZP_05718858.1 VMB_01590 hypothetical protein 14213 15094 -1
CDS - ZP_05718859.1 VMB_01600 pN,N'-diacetylchitobiose-specific phosphotransferase enzyme IIA component 15075 15389 -1
CDS - ZP_05718860.1 VMB_01610 hypothetical phosphotransferase system cellobiose-specific component IIC 15421 16764 -1
CDS celA ZP_05718861.1 VMB_01620 PTS system cellobiose-specific EIIB component 16768 17094 -1
CDS secF ZP_05718862.1 VMB_01630 Preprotein translocase subunit SecF 17473 18375 -1
CDS secD ZP_05718863.1 VMB_01640 protein export protein SecD 18379 20217 -1
CDS - ZP_05718864.1 VMB_01650 hypothetical protein 20269 20739 -1
CDS - ZP_05718865.1 VMB_01660 hypothetical protein 20817 21491 -1
CDS - ZP_05718866.1 VMB_01670 sensory box/GGDEF family protein 21879 23765 1
CDS glgC ZP_05718867.1 VMB_01680 glucose-1-phosphate adenylyltransferase 23969 25183 1
CDS - ZP_05718868.1 VMB_01690 chitodextrinase 25304 28441 -1
CDS - ZP_05718869.1 VMB_01700 iron-containing alcohol dehydrogenase 28958 30106 1
CDS - ZP_05718870.1 VMB_01710 conserved hypothetical protein 30221 30838 1
CDS pgtA ZP_05718871.1 VMB_01720 Phosphoglycerate transport system transcriptional regulatory protein pgtA 30835 31446 -1
CDS - ZP_05718872.1 VMB_01730 Phosphoglycerate transport system transcriptional regulatory protein pgtA 31440 32096 -1
CDS - ZP_05718873.1 VMB_01740 putative phosphoglycerate transport regulatory protein PgtB 32071 34440 -1
CDS - ZP_05718874.1 VMB_01750 phosphoglycerate transport regulatory protein PgtC 34437 35729 -1
CDS - ZP_05718875.1 VMB_01760 regulatory protein UhpC 36006 37385 1
CDS pykA ZP_05718876.1 VMB_01770 pyruvate kinase II 37467 38927 1
CDS torS ZP_05718877.1 VMB_01780 sensor protein TorS 39063 41969 -1
CDS torT ZP_05718878.1 VMB_01790 periplasmic protein TorT 42000 43049 1
CDS mgsA ZP_05718879.1 VMB_01800 methylglyoxal synthase 43104 43559 1
CDS pncA ZP_05718880.1 VMB_01810 pyrazinamidase/nicotinamidase 43646 44266 -1
CDS - ZP_05718881.1 VMB_01820 phosphoesterase, PAP2 family 44364 44852 -1
CDS dgkA ZP_05718882.1 VMB_01830 diacylglycerol kinase 45363 45719 1
CDS - ZP_05718883.1 VMB_01840 putative cytochrome B 45875 46159 1
CDS - ZP_05718884.1 VMB_01850 putative cytochrome B 46152 46568 1
CDS - ZP_05718885.1 VMB_01860 Zinc metalloprotease 46797 48566 -1
CDS helD ZP_05718886.1 VMB_01870 helicase IV 48930 50993 -1
CDS - ZP_05718887.1 VMB_01880 predicted inner membrane protein 51227 53395 1
CDS - ZP_05718888.1 VMB_01890 hypothetical protein 53606 53830 1
CDS - ZP_05718889.1 VMB_01900 hypothetical protein 53887 54177 1
CDS - ZP_05718890.1 VMB_01910 hydroxymethylglutaryl-coenzyme A reductase 54264 55517 1
CDS modC ZP_05718891.1 VMB_01920 molybdenum ABC transporter, ATP-binding protein 55588 56688 -1
CDS modB ZP_05718892.1 VMB_01930 molybdenum ABC transporter, permease protein 56688 57377 -1
CDS modA ZP_05718893.1 VMB_01940 molybdate ABC transporter, periplasmic molybdate-binding protein 57384 58142 -1
CDS cobQ ZP_05718894.1 VMB_01950 cobyric acid synthase 58154 59617 -1
CDS - ZP_05718895.1 VMB_01960 hypothetical protein 59796 60194 1
CDS - ZP_05718896.1 VMB_01970 hypothetical protein 60386 60925 1
CDS - ZP_05718897.1 VMB_01980 hypothetical protein 61084 61749 1
CDS luxQ ZP_05718898.1 VMB_01990 sensor histidine kinase LuxQ 61741 64314 -1
CDS - ZP_05718899.1 VMB_02000 LuxP protein 64334 65431 -1
CDS - ZP_05718900.1 VMB_02010 hypothetical protein 65630 66790 -1
CDS - ZP_05718901.1 VMB_02020 UPF0213 protein 66891 67190 -1
CDS - ZP_05718902.1 VMB_02030 UPF0502 protein 67190 67840 -1
CDS - ZP_05718903.1 VMB_02040 UPF0265 protein 68269 68589 1
CDS - ZP_05718904.1 VMB_02050 conserved hypothetical protein 68920 69252 1
CDS gplK ZP_05718905.1 VMB_02060 Glycerol kinase 69316 70833 -1
CDS glpF ZP_05718906.1 VMB_02070 Glycerol uptake facilitator and related permease 70968 71822 -1
CDS glpA ZP_05718907.1 VMB_02080 anaerobic glycerol-3-phosphate dehydrogenase subunit A 72474 74117 1
CDS glpB ZP_05718908.1 VMB_02090 anaerobic glycerol-3-phosphate dehydrogenase, subunit B 74114 75424 1
CDS glpC ZP_05718909.1 VMB_02100 Anaerobic glycerol-3-phosphate dehydrogenase subunit C 75421 76650 1
CDS mdtN ZP_05718910.1 VMB_02110 Multidrug resistance protein mdtN 76735 77769 -1
CDS pgaC ZP_05718911.1 VMB_02120 Biofilm PGA synthesis N-glycosyltransferase pgaC 77772 79088 -1
CDS - ZP_05718912.1 VMB_02130 hypothetical protein 79075 80403 -1
CDS fabH ZP_05718913.1 VMB_02140 3-oxoacyl-(acyl-carrier-protein) synthase III 80648 81862 -1
CDS trxC ZP_05718914.1 VMB_02150 thioredoxin 81910 82344 1
CDS - ZP_05718915.1 VMB_02160 Permeases of the major facilitator superfamily 82370 83686 1
CDS - ZP_05718916.1 VMB_02170 Hypothetical protein ygbA 83693 84100 -1
CDS - ZP_05718917.1 VMB_02180 lipase-related protein 84290 85078 1
tRNA - - VMB_t08 tRNA-Cys 85102 85175 -1
tRNA - - VMB_t09 tRNA-Leu 85204 85290 -1
CDS - ZP_05718918.1 VMB_02190 molybdopterin oxidoreductase, alpha subunit 85597 87921 -1
CDS - ZP_05718919.1 VMB_02200 transcriptional regulator, LysR family 88976 89878 1
CDS - ZP_05718920.1 VMB_02210 formate dehydrogenase oxidoreductase protein 89893 90759 1
CDS artM ZP_05718921.1 VMB_02220 arginine ABC transporter, permease protein 90790 91458 -1
CDS artQ ZP_05718922.1 VMB_02230 arginine ABC transporter, permease protein 91455 92144 -1
CDS artI ZP_05718923.1 VMB_02240 arginine ABC transporter, periplasmic arginine-binding protein 92146 92877 -1
CDS artP ZP_05718924.1 VMB_02250 arginine ABC transporter, ATP-binding protein 92991 93734 -1
tRNA - - VMB_t10 tRNA-Cys 94005 94078 -1
CDS viaA ZP_05718925.1 VMB_02260 Protein viaA 94247 95692 -1
CDS ravA ZP_05718926.1 VMB_02270 ATPase ravA 95701 97359 -1
CDS nudF ZP_05718927.1 VMB_02280 ADP-ribose pyrophosphatase 97664 98179 1
CDS ybjU ZP_05718928.1 VMB_02290 Low specificity L-threonine aldolase 98188 99195 1
CDS - ZP_05718929.1 VMB_02300 cytochrome c554 99330 99638 1
CDS - ZP_05718930.1 VMB_02310 transcriptional regulator, TetR family 99742 100482 1
CDS - ZP_05718931.1 VMB_02320 ATP-dependent RNA helicase, DEAD/DEAH box family 100556 101824 -1
CDS - ZP_05718932.1 VMB_02330 acyl carrier protein phosphodiesterase 101862 102443 -1
CDS tyrP ZP_05718933.1 VMB_02340 tyrosine-specific transport protein 102927 104129 1
CDS - ZP_05718934.1 VMB_02350 methyl-accepting chemotaxis protein 104327 105748 1
CDS galE ZP_05718935.1 VMB_02360 UDP-glucose 4-epimerase 105867 106883 -1
CDS - ZP_05718936.1 VMB_02370 Hypothetical UPF0271 protein 107214 107954 1
CDS - ZP_05718937.1 VMB_02380 Allophanate hydrolase subunit 1 107958 108662 1
CDS - ZP_05718938.1 VMB_02390 allophanate hydrolase subunit 2 108672 109601 1
CDS - ZP_05718939.1 VMB_02400 FAD dependent oxidoreductase 109650 111083 -1
CDS - ZP_05718940.1 VMB_02410 UDP-glucose 6-dehydrogenase 111192 112358 -1
CDS - ZP_05718941.1 VMB_02420 conserved hypothetical protein 112725 115172 -1
CDS - ZP_05718942.1 VMB_02430 ABC transporter, ATP-binding protein 115169 116083 -1
CDS - ZP_05718943.1 VMB_02440 arylesterase 115845 116444 1
CDS - ZP_05718944.1 VMB_02450 conserved hypothetical protein 116534 117727 1