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Vibrio mimicus VM603, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS rbsD ZP_05719740.1 VMB_10410 ribose ABC transporter protein 112 423 1
CDS rbsA ZP_05719741.1 VMB_10420 ribose ABC transporter, ATP-binding protein 450 1952 1
CDS - ZP_05719742.1 VMB_10430 D-ribose transport system permease protein 1949 2950 1
CDS rbsB ZP_05719743.1 VMB_10440 ribose ABC transporter, periplasmic D-ribose-binding protein 2954 3889 1
CDS rbsK ZP_05719744.1 VMB_10450 ribokinase 4030 4950 1
CDS rbsR ZP_05719745.1 VMB_10460 ribose operon repressor 4961 5965 1
CDS pnuC ZP_05719746.1 VMB_10470 PnuC protein 6092 6826 1
CDS - ZP_05719747.1 VMB_10480 uridine phosphorylase 6823 7551 1
CDS - ZP_05719748.1 VMB_10490 cyclic nucleotide binding-like protein 7684 8364 1
CDS glpQ ZP_05719749.1 VMB_10500 glycerophosphoryl diester phosphodiesterase 8400 9467 -1
CDS glpT ZP_05719750.1 VMB_10510 glycerol-3-phosphate transporter 9627 11036 -1
CDS - ZP_05719751.1 VMB_10520 conserved hypothetical protein 11384 11731 -1
CDS - ZP_05719752.1 VMB_10530 chitinase, putative 12151 13320 1
CDS - ZP_05719753.1 VMB_10540 C4-dicarboxylate transport sensor protein 13564 15573 -1
CDS lctP ZP_05719754.1 VMB_10550 L-lactate permease 15917 17353 1
CDS - ZP_05719755.1 VMB_10560 transcriptional regulator, GntR family 17386 18816 1
CDS - ZP_05719756.1 VMB_10570 conserved hypothetical protein 19021 19308 1
CDS - ZP_05719757.1 VMB_10580 conserved hypothetical protein 19363 20373 1
CDS - ZP_05719758.1 VMB_10590 immunogenic protein 20684 21691 1
CDS - ZP_05719759.1 VMB_10600 conserved hypothetical protein 21868 24009 1
CDS - ZP_05719760.1 VMB_10610 transcriptional regulator 24188 25216 1
CDS - ZP_05719761.1 VMB_10620 conserved hypothetical protein 25501 29325 1
CDS - ZP_05719762.1 VMB_10630 peptide deformylase 29471 29977 1
CDS - ZP_05719763.1 VMB_10640 ascorbate-specific PTS system enzyme IIC 30059 31315 -1
CDS - ZP_05719764.1 VMB_10650 Phosphotransferase system, galactitol-specific IIB component 31325 31615 -1
CDS - ZP_05719765.1 VMB_10660 Phosphotransferase system mannitol 31663 32106 -1
CDS - ZP_05719766.1 VMB_10670 transcriptional regulator 32278 33384 1
CDS - ZP_05719767.1 VMB_10680 oxidoreductase 33497 34828 1
CDS - ZP_05719768.1 VMB_10690 ATPase component of ABC transporter with duplicated ATPase 35143 36714 1
CDS - ZP_05719769.1 VMB_10700 tryptophan-specific transport protein 36762 37976 -1
CDS tnaA ZP_05719770.1 VMB_10710 tryptophanase 38073 39494 -1
CDS - ZP_05719771.1 VMB_10720 conserved hypothetical protein 40197 40367 1
CDS - ZP_05719772.1 VMB_10730 conserved hypothetical protein 40387 40869 -1
CDS - ZP_05719773.1 VMB_10740 GGDEF family protein 41226 43307 1
CDS cspA ZP_05719774.1 VMB_10750 cold shock transcriptional regulator CspA 43565 43765 1
CDS - ZP_05719775.1 VMB_10760 conserved hypothetical protein 43835 44551 -1
CDS - ZP_05719776.1 VMB_10770 conserved hypothetical protein 44693 46336 -1
CDS - ZP_05719777.1 VMB_10780 conserved hypothetical protein 46330 48162 -1
CDS - ZP_05719778.1 VMB_10790 conserved hypothetical protein 48164 48550 -1
CDS - ZP_05719779.1 VMB_10800 conserved hypothetical protein 48550 49119 -1
CDS - ZP_05719780.1 VMB_10810 conserved hypothetical protein 49106 49594 -1
CDS - ZP_05719781.1 VMB_10820 conserved hypothetical protein 49591 50517 -1
CDS - ZP_05719782.1 VMB_10830 MoxR -like protein 50527 51483 -1
CDS - ZP_05719783.1 VMB_10840 methyl-accepting chemotaxis protein 51785 53701 1
CDS - ZP_05719784.1 VMB_10850 conserved hypothetical protein 54067 54729 -1
CDS - ZP_05719785.1 VMB_10860 NupC family protein 55429 56637 1
CDS pepT ZP_05719786.1 VMB_10870 peptidase T 56932 58164 1
CDS - ZP_05719787.1 VMB_10880 conserved hypothetical protein 58338 59213 1
CDS - ZP_05719788.1 VMB_10890 sigma-54 dependent transcriptional regulator 59210 60802 -1
CDS hmpA ZP_05719789.1 VMB_10900 ferrisiderophore reductase 60994 62178 1
CDS - ZP_05719790.1 VMB_10910 cold shock DNA-binding domain protein 62257 62466 -1
CDS - ZP_05719791.1 VMB_10920 conserved hypothetical protein 62823 63047 1
CDS - ZP_05719792.1 VMB_10930 conserved hypothetical protein 63479 63856 1
CDS - ZP_05719793.1 VMB_10940 conserved hypothetical protein 64052 64297 1
CDS - ZP_05719794.1 VMB_10950 CheY-like receiver, response regulator 64384 65388 1
CDS - ZP_05719795.1 VMB_10960 conserved hypothetical protein 65388 65834 1
CDS - ZP_05719796.1 VMB_10970 conserved hypothetical protein 65848 67350 1
CDS ldhA ZP_05719797.1 VMB_10980 D-lactate dehydrogenase 67339 68334 -1
CDS - ZP_05719798.1 VMB_10990 Na+/H+ antiporter 68517 69857 1
CDS - ZP_05719799.1 VMB_11000 potassium channel like protein 69877 70701 -1
CDS - ZP_05719800.1 VMB_11010 conserved hypothetical protein 70768 71316 -1
CDS guaC ZP_05719801.1 VMB_11020 guanosine 5'-monophosphate oxidoreductase 71837 72880 1
CDS - ZP_05719802.1 VMB_11030 Integrase 73013 73414 -1
CDS - ZP_05719803.1 VMB_11040 Phosphotriesterase-like protein 74063 75037 1
CDS - ZP_05719804.1 VMB_11050 creatinine amidohydrolase 75047 75778 1
CDS ulaC ZP_05719805.1 VMB_11060 Ascorbate-specific phosphotransferase enzyme IIA component 75775 76203 1
CDS - ZP_05719806.1 VMB_11070 hypothetical protein 76555 77898 1
CDS ulaA ZP_05719807.1 VMB_11080 Ascorbate-specific permease IIC component ulaA 78102 79400 1
CDS - ZP_05719808.1 VMB_11090 conserved hypothetical protein 79449 80189 1
CDS - ZP_05719809.1 VMB_11100 Bacterial regulatory protein GntR, HTH 80197 80955 1
CDS - ZP_05719810.1 VMB_11110 conserved hypothetical protein 81291 82493 -1
CDS - ZP_05719811.1 VMB_11120 conserved hypothetical protein 82661 84586 -1
CDS - ZP_05719812.1 VMB_11130 TRAP dicarboxylate transporter, DctP subunit 84665 85648 -1
CDS - ZP_05719813.1 VMB_11140 conserved hypothetical protein 85838 87619 -1
CDS - ZP_05719814.1 VMB_11150 HTH-type transcriptional activator rhaS 87820 88683 1
CDS - ZP_05719815.1 VMB_11160 conserved hypothetical protein 88797 90320 -1
CDS - ZP_05719816.1 VMB_11170 conserved hypothetical protein 90523 91710 -1
CDS - ZP_05719817.1 VMB_11180 sulfatase 91770 93503 -1
CDS - ZP_05719818.1 VMB_11190 Glycoside hydrolase, family 31 93503 96142 -1
CDS - ZP_05719819.1 VMB_11200 conserved hypothetical protein 96202 98130 -1
CDS agaC ZP_05719820.1 VMB_11210 N-acetylgalactosamine-specific IID component, PTS system 100647 101423 1
CDS agaD ZP_05719821.1 VMB_11220 PTS system, N-acetylgalactosamine-specific IID component 101413 102264 1
CDS - ZP_05719822.1 VMB_11230 conserved hypothetical protein 102264 103016 1
CDS - ZP_05719823.1 VMB_11240 conserved hypothetical protein 103033 103764 1
CDS - ZP_05719824.1 VMB_11250 hypothetical protein 103843 105729 1
CDS - ZP_05719825.1 VMB_11260 conserved hypothetical protein 105993 106901 -1
CDS - ZP_05719826.1 VMB_11270 conserved hypothetical protein 106983 107150 -1
CDS dcuB ZP_05719827.1 VMB_11280 C4-dicarboxylate transporter, anaerobic 107143 107289 -1
CDS rhlE ZP_05719828.1 VMB_11290 ATP-dependent RNA helicase 107329 108684 -1
CDS - ZP_05719829.1 VMB_11300 C4-dicarboxylate transporter, anaerobic 108880 110208 -1
CDS nadE ZP_05719830.1 VMB_11310 NH(3)-dependent NAD(+) synthetase 110459 111289 -1
CDS - ZP_05719831.1 VMB_11320 Nicotinic acid mononucleotide adenylyltransferase 111392 111916 1
CDS - ZP_05719832.1 VMB_11330 Methyl-accepting chemotaxis protein 111937 113934 -1
CDS - ZP_05719833.1 VMB_11340 response regulator 114153 115694 1
CDS - ZP_05719834.1 VMB_11350 sensory box sensor histidine kinase 115729 117681 -1
CDS - ZP_05719835.1 VMB_11360 conserved hypothetical protein 117878 118819 1
CDS - ZP_05719836.1 VMB_11370 conserved hypothetical protein 118889 119530 -1