xBASE Logo
About | Contact | Home

Vibrio mimicus VM603, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
tRNA - - VMB_t57 tRNA-Leu 20 105 -1
tRNA - - VMB_t58 tRNA-Met 135 211 -1
CDS engD ZP_05720979.1 VMB_22800 GTP-dependent nucleic acid-binding protein engD 493 1602 -1
CDS - ZP_05720980.1 VMB_22810 Peptidyl-tRNA hydrolase 1595 2185 -1
CDS - ZP_05720981.1 VMB_22820 Ribose-phosphate pyrophosphokinase 2365 3300 -1
CDS ispE ZP_05720982.1 VMB_22830 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 3339 4208 -1
CDS lolB ZP_05720983.1 VMB_22840 Outer membrane lipoprotein LolB precursor 4208 4825 -1
CDS hemA ZP_05720984.1 VMB_22850 glutamyl-tRNA reductase 4983 6242 1
CDS prfA ZP_05720985.1 VMB_22860 Peptide chain release factor 1 6270 7358 1
CDS - ZP_05720986.1 VMB_22870 Protein hemK 7362 7895 1
CDS - ZP_05720987.1 VMB_22880 HemK protein 7912 8223 1
CDS - ZP_05720988.1 VMB_22890 conserved hypothetical protein 8223 8606 1
CDS - ZP_05720989.1 VMB_22900 conserved hypothetical protein 8621 9433 1
CDS kdsA ZP_05720990.1 VMB_22910 2-dehydro-3-deoxyphosphooctonate aldolase 9453 10304 1
CDS nutA ZP_05720991.1 VMB_22920 5'-nucleotidase 10648 12375 1
CDS - ZP_05720992.1 VMB_22930 conserved hypothetical protein 12517 12999 1
CDS uraA ZP_05720993.1 VMB_22940 uracil permease 13049 14347 -1
CDS - ZP_05720994.1 VMB_22950 conserved hypothetical protein 14525 15646 1
CDS - ZP_05720995.1 VMB_22960 conserved hypothetical protein 15775 16218 -1
CDS wrbA ZP_05720996.1 VMB_22970 Flavoprotein wrbA 16209 16775 -1
CDS arsC ZP_05720997.1 VMB_22980 arsenate reductase 16772 17122 -1
CDS - ZP_05720998.1 VMB_22990 conserved hypothetical protein 17146 18759 -1
CDS perM ZP_05720999.1 VMB_23000 permease PerM, putative 18893 20083 1
CDS - ZP_05721000.1 VMB_23010 methyl-accepting chemotaxis protein 20262 22133 1
CDS - ZP_05721001.1 VMB_23020 bacterioferritin comigratory protein 22231 22698 -1
CDS - ZP_05721002.1 VMB_23030 glycine cleavage system transcriptional repressor, putative 22713 23285 -1
CDS dapA ZP_05721003.1 VMB_23040 dihydrodipicolinate synthase 23532 24410 1
CDS nlpB ZP_05721004.1 VMB_23050 lipoprotein-34 NlpB 24468 25487 1
CDS - ZP_05721005.1 VMB_23060 conserved hypothetical protein 25631 25843 -1
CDS - ZP_05721006.1 VMB_23070 conserved hypothetical protein 25845 26519 -1
CDS dapE ZP_05721007.1 VMB_23080 succinyl-diaminopimelate desuccinylase 26522 27655 -1
CDS - ZP_05721008.1 VMB_23090 conserved hypothetical protein 27687 28034 -1
CDS - ZP_05721009.1 VMB_23100 conserved hypothetical protein 28334 28573 1
CDS - ZP_05721010.1 VMB_23110 conserved hypothetical protein 28641 28997 -1
CDS - ZP_05721011.1 VMB_23120 conserved hypothetical protein 29218 29604 1
CDS - ZP_05721012.1 VMB_23130 conserved hypothetical protein 29670 29873 1
CDS - ZP_05721013.1 VMB_23140 conserved hypothetical protein 29875 30579 1
CDS flaE ZP_05721014.1 VMB_23150 flagellin FlaE 30703 31839 1
CDS flaD ZP_05721015.1 VMB_23160 Flagellin D 32082 33215 1
CDS flaB ZP_05721016.1 VMB_23170 Flagellin B 33448 34578 1
CDS flaG ZP_05721017.1 VMB_23180 flagellar protein FlaG 34652 35113 1
CDS fliD ZP_05721018.1 VMB_23190 Flagellar hook-associated protein 2 35135 37135 1
CDS - ZP_05721019.1 VMB_23200 conserved hypothetical protein 37128 37442 1
CDS fliS ZP_05721020.1 VMB_23210 flagellar protein FliS 37453 37863 1
CDS flrA ZP_05721021.1 VMB_23220 sigma-54 dependent transcriptional activator 38096 39562 1
CDS flrB ZP_05721022.1 VMB_23230 sensory box sensor histidine kinase 39627 40730 1
CDS atoC ZP_05721023.1 VMB_23240 Acetoacetate metabolism regulatory protein atoC 40733 42169 1
CDS fliE ZP_05721024.1 VMB_23250 Flagellar hook-basal body complex protein fliE 42272 42556 1
CDS fliF ZP_05721025.1 VMB_23260 flagellar M-ring protein 42572 44311 1
CDS fliG ZP_05721026.1 VMB_23270 flagellar motor protein 44304 45350 1
CDS fliH ZP_05721027.1 VMB_23280 Flagellar assembly protein FliH, putative 45431 46231 1
CDS fliI ZP_05721028.1 VMB_23290 flagellum-specific ATP synthase 46235 47554 1
CDS fliJ ZP_05721029.1 VMB_23300 flagellar protein FliJ 47572 48015 1
CDS - ZP_05721030.1 VMB_23310 conserved hypothetical protein 48208 48531 1
CDS fliK ZP_05721031.1 VMB_23320 flagellar hook-length control protein FliK 48543 50159 1
CDS - ZP_05721032.1 VMB_23330 flagellar basal body-associated protein 50194 50694 1
CDS fliM ZP_05721033.1 VMB_23340 flagellar motor switch protein 50702 51751 1
CDS fliO ZP_05721034.1 VMB_23350 flagellar protein 52238 52627 1
CDS fliP ZP_05721035.1 VMB_23360 Flagellar biosynthetic protein fliP 52605 53504 1
CDS fliQ ZP_05721036.1 VMB_23370 flagellar biosynthesis protein 53517 53786 1
CDS - ZP_05721037.1 VMB_23380 flagellar biosynthesis protein 53795 54577 1
CDS - ZP_05721038.1 VMB_23390 conserved hypothetical protein 54638 54970 1
CDS fhlB ZP_05721039.1 VMB_23400 Flagellar biosynthetic protein flhB 54949 55716 1
CDS - ZP_05721040.1 VMB_23410 conserved hypothetical protein 55724 56284 -1
CDS - ZP_05721041.1 VMB_23420 conserved hypothetical protein 56351 57283 1
CDS aroC ZP_05721042.1 VMB_23430 chorismate synthase 57513 58598 1
CDS - ZP_05721043.1 VMB_23440 conserved hypothetical protein 58699 59322 -1
CDS - ZP_05721044.1 VMB_23450 conserved hypothetical protein 59689 60219 1
CDS - ZP_05721045.1 VMB_23460 conserved hypothetical protein 60226 60522 1
CDS - ZP_05721046.1 VMB_23470 conserved hypothetical protein 60718 61245 1
CDS - ZP_05721047.1 VMB_23480 conserved hypothetical protein 61324 63339 -1
CDS fabB ZP_05721048.1 VMB_23490 3-oxoacyl-[acyl-carrier-protein] synthase 1 63466 64677 1
CDS pdxB ZP_05721049.1 VMB_23500 Erythronate-4-phosphate dehydrogenase 64881 66026 1
CDS - ZP_05721050.1 VMB_23510 Aspartate-semialdehyde dehydrogenase 66067 67023 1
CDS - ZP_05721051.1 VMB_23520 Ferric uptake regulation protein 67098 67550 -1
CDS - ZP_05721052.1 VMB_23530 conserved hypothetical protein 67921 68421 1
CDS - ZP_05721053.1 VMB_23540 transcriptional regulator, LysR family 68423 69301 -1
CDS cidA ZP_05721054.1 VMB_23550 Holin-like protein cidA 69417 69839 1
CDS - ZP_05721055.1 VMB_23560 conserved hypothetical protein 69845 70537 1
CDS fldA ZP_05721056.1 VMB_23570 Flavodoxin 70640 71167 -1
CDS - ZP_05721057.1 VMB_23580 conserved hypothetical protein 71216 71437 -1
CDS ybfF ZP_05721058.1 VMB_23590 esterase/lipase YbfF, putative 71533 72306 -1
CDS seqA ZP_05721059.1 VMB_23600 SeqA protein 72399 72935 1
CDS - ZP_05721060.1 VMB_23610 hypothetical protein 73018 73350 1
CDS - ZP_05721061.1 VMB_23620 Phosphoglucomutase 73350 74690 1
CDS - ZP_05721062.1 VMB_23630 conserved hypothetical protein 74748 75497 -1
CDS - ZP_05721063.1 VMB_23640 conserved hypothetical protein 75575 76345 1
CDS gltA ZP_05721064.1 VMB_23650 Citrate synthase 76407 77696 -1
CDS sdhC ZP_05721065.1 VMB_23660 succinate dehydrogenase, cytochrome b556 subunit 78092 78484 1
CDS sdhD ZP_05721066.1 VMB_23670 succinate dehydrogenase hydrophobic membrane anchor protein 78478 78822 1
CDS sdhA ZP_05721067.1 VMB_23680 succinate dehydrogenase catalytic subunit 78823 80589 1
CDS sdhB ZP_05721068.1 VMB_23690 succinate dehydrogenase catalytic subunit 80604 81314 1
CDS sucA ZP_05721069.1 VMB_23700 2-oxoglutarate dehydrogenase, E1 component 81403 84213 1
CDS sucB ZP_05721070.1 VMB_23710 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase 84242 85456 1
CDS sucC ZP_05721071.1 VMB_23720 succinyl-CoA synthetase subunit beta 85627 86793 1
CDS sucD ZP_05721072.1 VMB_23730 succinyl-CoA synthetase alpha subunit 86793 87665 1
CDS znuB ZP_05721073.1 VMB_23740 zinc ABC transporter, permease protein 87753 88550 -1
CDS znuC ZP_05721074.1 VMB_23750 zinc ABC transporter, ATP-binding protein 88528 89316 -1
CDS znuA ZP_05721075.1 VMB_23760 zinc ABC transporter, periplasmic zinc-binding protein 89399 90283 1
CDS - ZP_05721076.1 VMB_23770 transcriptional regulator, AraC/XylS family 90484 93831 1