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Vibrio mimicus VM603, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05722078.1 VMB_33790 conserved hypothetical protein 249 557 -1
CDS - ZP_05722079.1 VMB_33800 transcriptional regulator, LysR family 673 1587 -1
CDS - ZP_05722080.1 VMB_33810 conserved hypothetical protein 1698 2666 1
CDS recC ZP_05722081.1 VMB_33820 exodeoxyribonuclease V, 125 kDa subunit 2760 6206 1
CDS recB ZP_05722082.1 VMB_33830 exodeoxyribonuclease V, 135 kDa subunit 6498 10124 1
CDS recD ZP_05722083.1 VMB_33840 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 10121 12241 1
CDS argA ZP_05722084.1 VMB_33850 N-acetylglutamate synthase; amino acid acetyltransferase 12687 14024 -1
CDS - ZP_05722085.1 VMB_33860 conserved hypothetical protein 14227 14643 1
CDS mltA ZP_05722086.1 VMB_33870 Membrane-bound lytic murein transglycosylase A 14714 15817 1
CDS - ZP_05722087.1 VMB_33880 conserved hypothetical protein 15914 16729 1
CDS - ZP_05722088.1 VMB_33890 conserved hypothetical protein 16733 17167 1
CDS - ZP_05722089.1 VMB_33900 Probable cysteine desulfurase 17237 18430 -1
CDS - ZP_05722090.1 VMB_33910 Protein thiJ 18435 19040 -1
CDS panE ZP_05722091.1 VMB_33920 2-dehydropantoate 2-reductase 19037 19987 -1
CDS ompK ZP_05722092.1 VMB_33930 Outer membrane protein ompK 20066 20965 -1
CDS - ZP_05722093.1 VMB_33940 conserved hypothetical protein 21215 21784 1
CDS sigW ZP_05722094.1 VMB_33950 RNA polymerase sigma factor sigW 21873 22457 1
CDS - ZP_05722095.1 VMB_33960 transcriptional activator 22454 23134 1
CDS - ZP_05722096.1 VMB_33970 ampG protein, putative 23205 24593 -1
CDS ppiA ZP_05722097.1 VMB_33980 peptidyl-prolyl cis-trans isomerase A 24663 25211 -1
CDS - ZP_05722098.1 VMB_33990 lipoprotein, putative 25204 25779 -1
CDS rlmG ZP_05722099.1 VMB_34000 Ribosomal RNA large subunit methyltransferase G 25821 26984 -1
CDS bolA ZP_05722100.1 VMB_34010 BolA protein 27117 27437 1
CDS nqrA ZP_05722101.1 VMB_34020 Na(+)-translocating NADH-quinone reductase subunit A 27855 29261 1
CDS nqrB ZP_05722102.1 VMB_34030 Na(+)-translocating NADH-quinone reductase subunit B 29267 30514 1
CDS nqrC ZP_05722103.1 VMB_34040 Na(+)-translocating NADH-quinone reductase subunit C 30501 31274 1
CDS nqrD ZP_05722104.1 VMB_34050 NADH-ubiquinone oxidoreductase 31274 31906 1
CDS nqrE ZP_05722105.1 VMB_34060 Na(+)-translocating NADH-quinone reductase subunit E 31914 32510 1
CDS nqrF ZP_05722106.1 VMB_34070 Na(+)-translocating NADH-quinone reductase subunit F 32544 33770 1
CDS apbE ZP_05722107.1 VMB_34080 thiamin biosynthesis lipoprotein ApbE 33920 34924 1
CDS - ZP_05722108.1 VMB_34090 conserved hypothetical protein 34941 35174 1
CDS dinP ZP_05722109.1 VMB_34100 DNA polymerase IV 35283 36356 1
CDS - ZP_05722110.1 VMB_34110 conserved hypothetical protein 36550 37293 1
CDS - ZP_05722111.1 VMB_34120 GGDEF family protein 37359 38876 1
CDS - ZP_05722112.1 VMB_34130 Sodium-dependent transporter 39035 40390 1
CDS - ZP_05722113.1 VMB_34140 hypothetical protein 40466 41491 -1
CDS rimK ZP_05722114.1 VMB_34150 Ribosomal protein S6 modification protein 41514 42419 -1
CDS - ZP_05722115.1 VMB_34160 conserved hypothetical protein 42416 42859 -1
CDS pepD ZP_05722116.1 VMB_34170 aminoacyl-histidine dipeptidase 43205 44713 -1
CDS - ZP_05722117.1 VMB_34180 conserved hypothetical protein 45553 46845 1
CDS - ZP_05722118.1 VMB_34190 xanthine phosphoribosyltransferase 46916 47347 1
CDS - ZP_05722119.1 VMB_34200 conserved hypothetical protein 47444 48691 1
CDS - ZP_05722120.1 VMB_34210 Sigma factor-binding protein crl 48792 49181 1
CDS proB ZP_05722121.1 VMB_34220 gamma-glutamyl kinase 49302 50435 1
CDS proA ZP_05722122.1 VMB_34230 gamma-glutamyl phosphate reductase 50444 51697 1
CDS - ZP_05722123.1 VMB_34240 conserved hypothetical protein 51799 52248 1
CDS ribD ZP_05722124.1 VMB_34250 diaminohydroxyphosphoribosylaminopyrimidine deaminase 52261 53364 1
CDS ribE ZP_05722125.1 VMB_34260 Riboflavin synthase alpha chain 53369 54022 1
CDS - ZP_05722126.1 VMB_34270 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II 54062 55171 1
CDS ribH ZP_05722127.1 VMB_34280 6,7-dimethyl-8-ribityllumazine synthase 55312 55782 1
CDS nusB ZP_05722128.1 VMB_34290 N utilization substance protein B 55794 56252 1
CDS thiL ZP_05722129.1 VMB_34300 Thiamine-monophosphate kinase 56339 57316 1
CDS pgpA ZP_05722130.1 VMB_34310 Phosphatidylglycerophosphatase A 57313 57819 1
CDS - ZP_05722131.1 VMB_34320 conserved hypothetical protein 57852 58235 -1
CDS glnD ZP_05722132.1 VMB_34330 [Protein-PII] uridylyltransferase 58434 61064 -1
CDS - ZP_05722133.1 VMB_34340 Methionine aminopeptidase 61169 62011 -1
CDS rpsB ZP_05722134.1 VMB_34350 30S ribosomal protein S2 62280 63086 1
CDS - ZP_05722135.1 VMB_34360 Elongation factor Ts 63219 64061 1
CDS pyrH ZP_05722136.1 VMB_34370 uridylate kinase 64241 64972 1
CDS - ZP_05722137.1 VMB_34380 Ribosome-recycling factor 65062 65583 1
CDS - ZP_05722138.1 VMB_34390 Undecaprenyl diphosphate synthase 65675 66427 1
CDS cdsA ZP_05722139.1 VMB_34400 Phosphatidate cytidylyltransferase 66487 67287 1
CDS - ZP_05722140.1 VMB_34410 1-deoxy-D-xylulose 5-phosphate reductoisomerase 67336 68544 1
CDS - ZP_05722141.1 VMB_34420 Putative zinc metalloprotease 68541 69899 1
CDS - ZP_05722142.1 VMB_34430 surface antigen 69948 72359 1
CDS ompH ZP_05722143.1 VMB_34440 outer membrane protein OmpH 72383 72883 1
CDS lpxD ZP_05722144.1 VMB_34450 UDP-3-O-3-hydroxymyristoyl glucosamine N-acyltransferase 72893 73945 1
CDS fabZ ZP_05722145.1 VMB_34460 (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase 74024 74485 1
CDS plxA ZP_05722146.1 VMB_34470 acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase 74487 75275 1
CDS lpxB ZP_05722147.1 VMB_34480 lipid-A-disaccharide synthase 75458 76603 1
CDS rnhB ZP_05722148.1 VMB_34490 ribonuclease HII 76622 77242 1
CDS dnaE ZP_05722149.1 VMB_34500 DNA polymerase III subunit alpha 77441 80920 1
CDS accA ZP_05722150.1 VMB_34510 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 80975 81934 1
CDS tilS ZP_05722151.1 VMB_34520 tRNA(Ile)-lysidine synthase 82075 83397 1
CDS - ZP_05722152.1 VMB_34530 Cytochrome c-552 83433 83756 1
CDS - ZP_05722153.1 VMB_34540 Nitrogen regulatory protein P-II 83861 84199 1
CDS - ZP_05722154.1 VMB_34550 conserved hypothetical protein 84277 85122 1
CDS - ZP_05722155.1 VMB_34560 Membrane-bound lytic murein transglycosylase D 85145 86740 -1
CDS - ZP_05722156.1 VMB_34570 hydroxyacylglutathione hydrolase GloB, putative 86812 87570 -1
CDS - ZP_05722157.1 VMB_34580 conserved hypothetical protein 87608 88345 1
CDS rnhA ZP_05722158.1 VMB_34590 Ribonuclease HI 88387 88857 -1
CDS dnaQ ZP_05722159.1 VMB_34600 DNA polymerase III subunit epsilon 88914 89657 1
CDS - ZP_05722160.1 VMB_34610 conserved hypothetical protein 89666 90922 1
CDS fadE ZP_05722161.1 VMB_34620 acyl-CoA dehydrogenase 91027 93471 -1
CDS lpcA ZP_05722162.1 VMB_34630 phosphoheptose isomerase 93798 94373 1
CDS yafJ ZP_05722163.1 VMB_34640 Putative glutamine amidotransferase yafJ 94439 95284 1
CDS purN ZP_05722164.1 VMB_34650 Phosphoribosylglycinamide formyltransferase 95432 96070 -1
CDS purM ZP_05722165.1 VMB_34660 Phosphoribosylformylglycinamidine cyclo-ligase 96073 97113 -1
CDS - ZP_05722166.1 VMB_34670 Uracil phosphoribosyltransferase 97280 97906 1
CDS rluF ZP_05722167.1 VMB_34680 Ribosomal large subunit pseudouridine synthase F 98014 99012 -1
CDS - ZP_05722168.1 VMB_34690 conserved hypothetical protein 99079 99657 -1
tRNA - - VMB_t68 tRNA-Pro 100208 100284 1
CDS - ZP_05722169.1 VMB_34700 conserved hypothetical protein 100417 101283 -1
CDS - ZP_05722170.1 VMB_34710 N,N'-diacetylchitobiase 101730 104381 1