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Vibrio mimicus VM603, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05722188.1 VMB_34890 conserved hypothetical protein 3 800 1
CDS - ZP_05722189.1 VMB_34900 conserved hypothetical protein 965 1180 1
CDS - ZP_05722190.1 VMB_34910 conserved hypothetical protein 1186 1452 -1
CDS hslJ ZP_05722191.1 VMB_34920 heat shock protein HslJ 1649 2041 1
CDS - ZP_05722192.1 VMB_34930 ABC transporter, periplasmic substrate-binding protein, putative 2222 3370 1
CDS - ZP_05722193.1 VMB_34940 putative ABC transporter, permease protein 3380 5083 1
CDS - ZP_05722194.1 VMB_34950 ABC transporter, ATP-binding protein, putative 5049 5696 1
CDS - ZP_05722195.1 VMB_34960 conserved hypothetical protein 5689 6324 1
CDS - ZP_05722196.1 VMB_34970 pseudouridine synthase Rlu family protein 6406 7107 -1
CDS - ZP_05722197.1 VMB_34980 sodium-dependent transporter, putative 7216 7857 -1
CDS - ZP_05722198.1 VMB_34990 putative sodium-dependent transporter 7891 8502 -1
CDS - ZP_05722199.1 VMB_35000 cardiolipin synthase 8887 10341 1
CDS metC ZP_05722200.1 VMB_35010 cystathionine beta-lyase 10489 11613 1
CDS - ZP_05722201.1 VMB_35020 DNA-3-methyladenine glycosidase I 11670 12371 -1
CDS - ZP_05722202.1 VMB_35030 NADP-specific glutamate dehydrogenase 12472 13821 -1
CDS pspC ZP_05722203.1 VMB_35040 phage shock protein C 14143 14532 -1
CDS pspB ZP_05722204.1 VMB_35050 phage shock protein B 14525 14758 -1
CDS pspA ZP_05722205.1 VMB_35060 phage shock protein A 14772 15440 -1
CDS pspF ZP_05722206.1 VMB_35070 psp operon transcriptional activator 15655 16680 1
CDS sapA ZP_05722207.1 VMB_35080 peptide ABC transporter, periplasmic peptide-binding protein 16795 18417 1
CDS sapB ZP_05722208.1 VMB_35090 peptide ABC transporter, permease protein 18417 19379 1
CDS sapC ZP_05722209.1 VMB_35100 peptide ABC transporter, permease protein 19366 20253 1
CDS sapD ZP_05722210.1 VMB_35110 peptide ABC transporter, ATP-binding protein 20253 21248 1
CDS sapF ZP_05722211.1 VMB_35120 ABC-type antimicrobial peptide transport system, ATPase component 21245 22033 1
CDS - ZP_05722212.1 VMB_35130 conserved hypothetical protein 22067 22804 1
CDS - ZP_05722213.1 VMB_35140 conserved hypothetical protein 22835 23224 -1
CDS - ZP_05722214.1 VMB_35150 putative manganese-dependent inorganic pyrophosphatase 23362 24267 -1
CDS - ZP_05722215.1 VMB_35160 conserved hypothetical protein 24513 25721 1
CDS - ZP_05722216.1 VMB_35170 Putative ribosome biogenesis GTPase rsgA 2 26063 27112 1
CDS - ZP_05722217.1 VMB_35180 conserved hypothetical protein 27258 28994 -1
CDS torA ZP_05722218.1 VMB_35190 trimethylamine-N-oxide reductase 29202 31664 -1
CDS torC ZP_05722219.1 VMB_35200 cytochrome c-type protein TorC 31688 32872 -1
CDS napE ZP_05722220.1 VMB_35210 napE protein 32919 33101 -1
CDS - ZP_05722221.1 VMB_35220 hypothetical protein 33420 33653 -1
CDS - ZP_05722222.1 VMB_35230 formate transporter 1, putative 33839 34681 -1
CDS - ZP_05722223.1 VMB_35240 conserved hypothetical protein 34957 35196 1
CDS - ZP_05722224.1 VMB_35250 conserved hypothetical protein 35304 36134 1
CDS - ZP_05722225.1 VMB_35260 conserved hypothetical protein 36127 36771 1
CDS - ZP_05722226.1 VMB_35270 conserved hypothetical protein 36851 37078 1
CDS - ZP_05722227.1 VMB_35280 GGDEF family protein 37264 39141 1
CDS yciB ZP_05722228.1 VMB_35290 putative intracellular septation protein 39266 39811 1
CDS yciA ZP_05722229.1 VMB_35300 Putative acyl-CoA thioester hydrolase yciA 39923 40342 1
CDS - ZP_05722230.1 VMB_35310 conserved hypothetical protein 40417 40713 1
CDS - ZP_05722231.1 VMB_35320 conserved hypothetical protein 40715 41113 1
CDS - ZP_05722232.1 VMB_35330 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 41191 43476 -1
CDS metR ZP_05722233.1 VMB_35340 transcriptional activator MetR 43873 44790 1
CDS - ZP_05722234.1 VMB_35350 conserved hypothetical protein 45113 45871 -1
CDS - ZP_05722235.1 VMB_35360 zinc protease, insulinase family 46033 48792 1
CDS - ZP_05722236.1 VMB_35370 conserved hypothetical protein 48856 51315 -1
CDS - ZP_05722237.1 VMB_35380 conserved hypothetical protein 51609 53963 1
CDS - ZP_05722238.1 VMB_35390 membrane protein, putative 54011 54595 -1
CDS - ZP_05722239.1 VMB_35400 transcriptional regulator, AsnC family 54727 55146 1
CDS mukB ZP_05722240.1 VMB_35410 chromosome partition protein MukB 55227 59702 -1
CDS mukE ZP_05722241.1 VMB_35420 condesin subunit E 59699 60421 -1
CDS mukF ZP_05722242.1 VMB_35430 conserved hypothetical protein 60402 61739 -1
CDS smtA ZP_05722243.1 VMB_35440 smtA protein 61751 62533 -1
CDS - ZP_05722244.1 VMB_35450 conserved hypothetical protein 62623 63486 1
CDS torR ZP_05722245.1 VMB_35460 DNA-binding response regulator TorR 63579 64283 -1
CDS torD ZP_05722246.1 VMB_35470 torD protein 64508 65173 1
CDS - ZP_05722247.1 VMB_35480 transcriptional regulator, LacI family 65549 66559 1
CDS - ZP_05722248.1 VMB_35490 conserved hypothetical protein 66946 67506 1
CDS - ZP_05722249.1 VMB_35500 conserved hypothetical protein 67765 68454 1
CDS - ZP_05722250.1 VMB_35510 conserved hypothetical protein 68484 68795 1
CDS - ZP_05722251.1 VMB_35520 beta-ketoadipate enol-lactone hydrolase, putative 68801 69607 -1
CDS glgA ZP_05722252.1 VMB_35530 glycogen synthase 69738 71192 -1
CDS - ZP_05722253.1 VMB_35540 glucose-1-phosphate adenylyltransferase 71194 72411 -1
CDS topA ZP_05722254.1 VMB_35550 DNA topoisomerase I 73080 75710 -1
CDS - ZP_05722255.1 VMB_35560 conserved hypothetical protein 76041 76295 1
CDS aroA ZP_05722256.1 VMB_35570 3-phosphoshikimate 1-carboxyvinyltransferase 76390 77760 -1
CDS - ZP_05722257.1 VMB_35580 Leucyl/phenylalanyl-tRNA--protein transferase 77979 78710 1
CDS - ZP_05722258.1 VMB_35590 Putative arginyl-tRNA--protein transferase 78714 79415 1
CDS infA ZP_05722259.1 VMB_35600 translation initiation factor IF-1 79499 79717 1
CDS - ZP_05722260.1 VMB_35610 conserved hypothetical protein 79901 81106 -1
CDS - ZP_05722261.1 VMB_35620 oxidoreductase, acyl-CoA dehydrogenase family 81305 83587 -1
CDS - ZP_05722262.1 VMB_35630 transcriptional regulator, TetR family 83681 84355 -1
CDS - ZP_05722263.1 VMB_35640 conserved hypothetical protein 84612 85646 1
CDS - ZP_05722264.1 VMB_35650 hypothetical protein 85650 85946 1
CDS - ZP_05722265.1 VMB_35660 Succinate-semialdehyde dehydrogenase 85927 87378 -1
CDS rutR ZP_05722266.1 VMB_35670 HTH-type transcriptional regulator rutR 87551 88147 -1
CDS - ZP_05722267.1 VMB_35680 periplasmic linker protein, putative 88261 89475 1
CDS - ZP_05722268.1 VMB_35690 transporter, AcrB/D/F family 89475 92525 1
CDS - ZP_05722269.1 VMB_35700 conserved hypothetical protein 92817 93611 1
CDS pepE ZP_05722270.1 VMB_35710 Peptidase E 93672 94403 -1
CDS - ZP_05722271.1 VMB_35720 Peptidase T 94424 95656 -1
CDS dcuD ZP_05722272.1 VMB_35730 Putative cryptic C4-dicarboxylate transporter dcuD 95666 97027 -1
CDS - ZP_05722273.1 VMB_35740 transcriptional regulator 97091 97948 -1
CDS - ZP_05722274.1 VMB_35750 Beta-galactosidase 98548 99360 1
CDS - ZP_05722275.1 VMB_35760 conserved hypothetical protein 99391 101043 1
CDS - ZP_05722276.1 VMB_35770 TPR-repeat-containing protein 101340 102380 -1
CDS - ZP_05722277.1 VMB_35780 Flp pilus assembly protein TadC 102391 103335 -1
CDS - ZP_05722278.1 VMB_35790 Flp pilus assembly protein TadB 103337 104302 -1
CDS - ZP_05722279.1 VMB_35800 Flp pilus assembly protein 104315 105802 -1
CDS - ZP_05722280.1 VMB_35810 Flp pilus assembly protein, ATPase CpaE 105838 107055 -1
CDS - ZP_05722281.1 VMB_35820 hypothetical protein 107066 107551 -1
CDS - ZP_05722282.1 VMB_35830 hypothetical protein 107581 108018 -1
CDS - ZP_05722283.1 VMB_35840 hypothetical protein 108020 109240 -1
CDS - ZP_05722284.1 VMB_35850 conserved hypothetical protein 109261 109503 -1
CDS - ZP_05722285.1 VMB_35860 Flp pilus assembly protein 109526 110992 -1
CDS - ZP_05722286.1 VMB_35870 Flp pilus assembly protein CpaB 111003 111341 -1