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Vibrio orientalis CIP 102891, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
rRNA - - VIA_rna001 16S ribosomal RNA 1 589 -1
CDS - ZP_05942557.1 VIA_000001 RNA-binding protein 1188 1637 1
CDS - ZP_05942558.1 VIA_000002 glutamate racemase 1603 2406 -1
CDS - ZP_05942559.1 VIA_000003 ATPase of the PP-loop superfamily 2435 3049 -1
CDS - ZP_05942560.1 VIA_000004 outer membrane vitamin B12 receptor BtuB 3165 5027 -1
CDS - ZP_05942561.1 VIA_000005 tRNA (Uracil54-C5-)-methyltransferase 5486 6595 1
CDS - ZP_05942562.1 VIA_000006 ATPase of the AAA+ class 6672 7058 -1
CDS - ZP_05942563.1 VIA_000007 unsaturated fatty acid biosythesis repressor FabR 7058 7690 -1
CDS - ZP_05942564.1 VIA_000008 soluble pyridine nucleotide transhydrogenase 7985 9385 1
CDS - ZP_05942565.1 VIA_000009 multidrug efflux transporter 9450 9782 -1
CDS - ZP_05942566.1 VIA_000010 S-formylglutathione hydrolase 9880 10719 -1
CDS - ZP_05942567.1 VIA_000011 S-(hydroxymethyl)glutathione dehydrogenase 10908 12056 -1
CDS - ZP_05942568.1 VIA_000012 hypothetical protein 12053 12178 -1
CDS - ZP_05942569.1 VIA_000013 DNA-damage-inducible protein F 12272 13564 -1
CDS - ZP_05942570.1 VIA_000014 O-methyltransferase-related protein 13651 14463 -1
CDS - ZP_05942571.1 VIA_000015 SOS-response repressor and protease LexA 14550 15170 -1
CDS - ZP_05942572.1 VIA_000016 diacylglycerol kinase 15257 15493 -1
CDS - ZP_05942573.1 VIA_000017 glycerol-3-phosphate acyltransferase 15823 18267 1
CDS - ZP_05942574.1 VIA_000018 4-hydroxybenzoate polyprenyltransferase 18320 19174 -1
CDS - ZP_05942575.1 VIA_000019 chorismate--pyruvate lyase 19171 19713 -1
CDS - ZP_05942576.1 VIA_000020 flagellar biosynthesis protein FliL 19879 20286 1
CDS - ZP_05942577.1 VIA_000021 protein GlpG 20341 21177 -1
CDS - ZP_05942578.1 VIA_000022 thiosulfate sulfurtransferase GlpE 21182 21508 -1
CDS - ZP_05942579.1 VIA_000023 RNA polymerase sigma factor RpoH 21920 22777 -1
CDS - ZP_05942580.1 VIA_000024 cell division protein FtsX 22960 23928 -1
CDS - ZP_05942581.1 VIA_000025 cell division transporter ATP-binding protein FtsE 23918 24592 -1
CDS - ZP_05942582.1 VIA_000026 signal recognition particle receptor protein FtsY 24647 25867 -1
CDS - ZP_05942583.1 VIA_000027 ribosomal RNA small subunit methyltransferase D 26077 26676 1
CDS - ZP_05942584.1 VIA_000028 hypothetical protein 26690 26956 1
CDS - ZP_05942585.1 VIA_000029 multiple antibiotic resistance protein marC 26993 27577 -1
CDS - ZP_05942586.1 VIA_000030 hypothetical protein 27708 27944 -1
CDS - ZP_05942587.1 VIA_000031 predicted membrane protein 28008 28631 -1
CDS - ZP_05942588.1 VIA_000032 hypothetical protein 28681 28809 1
CDS - ZP_05942589.1 VIA_000033 hypothetical protein 29546 29911 -1
CDS - ZP_05942590.1 VIA_000034 hypothetical protein 30176 30505 1
CDS - ZP_05942591.1 VIA_000035 hypothetical protein 30502 31515 -1
CDS - ZP_05942592.1 VIA_000036 permease 31614 32834 -1
CDS - ZP_05942593.1 VIA_000037 predicted protein-tyrosine phosphatase 32931 33422 -1
CDS - ZP_05942594.1 VIA_000038 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase 33580 34581 -1
CDS - ZP_05942595.1 VIA_000039 transcriptional regulator ArsR family 34614 34898 -1
CDS - ZP_05942596.1 VIA_000040 predicted signal transduction protein 35063 36301 -1
CDS - ZP_05942597.1 VIA_000041 putative threonine efflux protein 36320 36937 -1
CDS - ZP_05942598.1 VIA_000042 lysophospholipase L2 37025 38011 1
CDS - ZP_05942599.1 VIA_000043 hydrolase (HAD superfamily) 38121 38948 1
CDS - ZP_05942600.1 VIA_000044 hypothetical protein 39008 39370 -1
CDS - ZP_05942601.1 VIA_000045 predicted membrane protein 39517 41043 1
CDS - ZP_05942602.1 VIA_000046 hypothetical protein 41160 41678 1
CDS - ZP_05942603.1 VIA_000047 sensory box/GGDEF family protein 41662 43926 -1
CDS - ZP_05942604.1 VIA_000048 2-haloalkanoic acid dehalogenase 44222 44944 -1
CDS - ZP_05942605.1 VIA_000049 tyrosine recombinase XerC 44941 45873 -1
CDS - ZP_05942606.1 VIA_000050 hypothetical protein 45845 46549 -1
CDS - ZP_05942607.1 VIA_000051 diaminopimelate epimerase 46713 47498 -1
CDS - ZP_05942608.1 VIA_000052 diaminopimelate decarboxylase 47554 48807 -1
CDS - ZP_05942609.1 VIA_000053 hypothetical protein 48837 48956 -1
CDS - ZP_05942610.1 VIA_000054 frataxin CyaY 49032 49346 1
CDS - ZP_05942611.1 VIA_000055 adenylate cyclase 49408 51936 -1
CDS - ZP_05942612.1 VIA_000056 porphobilinogen deaminase 52272 53210 1
CDS - ZP_05942613.1 VIA_000057 uroporphyrinogen-III synthase 53217 53960 1
CDS - ZP_05942614.1 VIA_000058 HemX-like protein 53964 55187 1
CDS - ZP_05942615.1 VIA_000059 HemY-like protein 55187 56374 1
CDS - ZP_05942616.1 VIA_000060 hypothetical protein 56414 56554 1
tRNA - - VIA_rna002 tRNA-Asp 57120 57196 -1
rRNA - - VIA_rna003 5S ribosomal RNA 57227 57347 -1
rRNA - - VIA_rna004 23S ribosomal RNA 57433 60323 -1
tRNA - - VIA_rna005 tRNA-Ala 60622 60697 -1
tRNA - - VIA_rna006 tRNA-Ile 60738 60814 -1
rRNA - - VIA_rna007 16S ribosomal RNA 60960 62425 -1
CDS - ZP_05942617.1 VIA_000061 NAD(P)H-flavin reductase (NAD(P)H:flavin oxidoreductase) 62984 63697 -1
CDS - ZP_05942618.1 VIA_000062 ferredoxin 63712 63981 -1
CDS - ZP_05942619.1 VIA_000063 3-polyprenyl-4-hydroxybenzoate carboxy-lyase 63978 65834 -1
CDS - ZP_05942620.1 VIA_000064 hypothetical protein 65928 66923 -1
CDS - ZP_05942621.1 VIA_000065 transcription termination factor Rho 67031 68314 -1
CDS - ZP_05942622.1 VIA_000066 thioredoxin reductase 68486 68812 -1
CDS - ZP_05942623.1 VIA_000067 ATP-dependent RNA helicase RhlB 68925 70226 1
CDS - ZP_05942624.1 VIA_000068 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase 70234 71724 1
CDS - ZP_05942625.1 VIA_000069 putative preQ0 transporter 71800 72471 -1
CDS - ZP_05942626.1 VIA_000070 aminopeptidase N 72670 72990 -1
CDS - ZP_05942627.1 VIA_000071 ATP-dependent DNA helicase RecQ 72983 74791 -1
CDS - ZP_05942628.1 VIA_000072 protein rarD 74987 75901 1
CDS - ZP_05942629.1 VIA_000073 transcriptional regulator AraC/XylS family 75975 76769 1
CDS - ZP_05942630.1 VIA_000074 threonine efflux protein 76842 77510 1
CDS - ZP_05942631.1 VIA_000075 gamma-glutamyltranspeptidase 77621 79369 1
CDS - ZP_05942632.1 VIA_000076 ATP-dependent DNA helicase UvrD/PcrA 80143 82314 -1
CDS - ZP_05942633.1 VIA_000077 putative signal peptide protein 82636 82896 1
CDS - ZP_05942634.1 VIA_000078 hypothetical protein 82975 83832 1
CDS - ZP_05942635.1 VIA_000079 hypothetical protein 83829 84593 1
CDS - ZP_05942636.1 VIA_000080 membrane protein 84604 85059 1
CDS - ZP_05942637.1 VIA_000081 conserved hypothetical protein 85056 85241 -1
CDS - ZP_05942638.1 VIA_000082 oligopeptidase A 85338 87380 -1
CDS - ZP_05942639.1 VIA_000083 hypothetical protein 87599 88438 1
CDS - ZP_05942640.1 VIA_000084 hypothetical protein 88481 88615 -1
CDS - ZP_05942641.1 VIA_000085 glutathione reductase 88642 89997 1
CDS - ZP_05942642.1 VIA_000086 gamma-D-Glutamyl-meso-Diaminopimelate Amidase 90088 90804 -1
CDS - ZP_05942643.1 VIA_000087 oligopeptide ABC transporter periplasmic oligopeptide-binding protein OppA 90920 92548 1
CDS - ZP_05942644.1 VIA_000088 hypothetical protein 92619 93548 -1
CDS - ZP_05942645.1 VIA_000089 predicted membrane-associated metal-dependent hydrolase 93712 95319 -1
CDS - ZP_05942646.1 VIA_000090 diacylglycerol kinase 95361 95672 -1
CDS - ZP_05942647.1 VIA_000091 peptide ABC transporter permease protein 95932 96870 -1
CDS - ZP_05942648.1 VIA_000092 peptide ABC transporter permease component 96873 97805 -1
CDS - ZP_05942649.1 VIA_000093 peptide ABC transporter peptide-binding protein 97982 99535 -1