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Yersinia pestis Pestoides A, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_04456437.1 YPS_0158 carbonic anhydrase, family 3 184 726 1
CDS aroE ZP_04456438.1 YPS_0159 dehydroshikimate reductase, NAD(P)-binding 781 1602 -1
CDS - ZP_04456439.1 YPS_0160 Sua5 YciO YrdC YwlC family protein 1611 2183 -1
CDS - ZP_04456440.1 YPS_0161 putative DNA-binding protein 2185 2724 -1
CDS smg ZP_04456441.1 YPS_0162 conserved protein 2765 3238 -1
CDS - ZP_04456442.1 YPS_0163 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake 3210 4331 -1
CDS def ZP_04456443.1 YPS_0164 peptide deformylase 4466 4978 1
CDS fmt ZP_04456444.1 YPS_0165 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase 5003 5950 1
CDS - ZP_04456445.1 YPS_0166 16S rRNA m5C967 methyltransferase 6044 7333 1
CDS trkA ZP_04456446.1 YPS_0167 NAD-binding component of TrK potassium transporter 7389 8765 1
CDS mscL ZP_04456447.1 YPS_0168 mechanosensitive channel 8904 9317 1
CDS - ZP_04456448.1 YPS_0169 hypothetical protein 9427 9627 -1
CDS - ZP_04456449.1 YPS_0170 MerR-family transcriptional regulator 9715 10140 -1
CDS rplQ ZP_04456450.1 YPS_0171 50S ribosomal subunit protein L17 10587 10976 -1
CDS rpoA ZP_04456451.1 YPS_0172 RNA polymerase, alpha subunit 11017 12006 -1
CDS rpsD ZP_04456452.1 YPS_0173 30S ribosomal subunit protein S4 12032 12652 -1
CDS rpsK ZP_04456453.1 YPS_0174 30S ribosomal subunit protein S11 12683 13072 -1
CDS rpsM ZP_04456454.1 YPS_0175 30S ribosomal subunit protein S13 13089 13445 -1
CDS rpmJ ZP_04456455.1 YPS_0176 50S ribosomal protein L36 13593 13709 -1
CDS secY ZP_04456456.1 YPS_0177 preprotein translocase membrane subunit 13743 15074 -1
CDS rplO ZP_04456457.1 YPS_0178 50S ribosomal subunit protein L15 15082 15516 -1
CDS rpmD ZP_04456458.1 YPS_0179 50S ribosomal subunit protein L30 15520 15699 -1
CDS rpsE ZP_04456459.1 YPS_0180 30S ribosomal subunit protein S5 15702 16205 -1
CDS rplR ZP_04456460.1 YPS_0181 50S ribosomal subunit protein L18 16220 16573 -1
CDS rplF ZP_04456461.1 YPS_0182 50S ribosomal subunit protein L6 16583 17116 -1
CDS rpsH ZP_04456462.1 YPS_0183 30S ribosomal subunit protein S8 17131 17523 -1
CDS rpsN ZP_04456463.1 YPS_0184 30S ribosomal subunit protein S14 17557 17862 -1
CDS rplE ZP_04456464.1 YPS_0185 50S ribosomal subunit protein L5 17876 18415 -1
CDS rplX ZP_04456465.1 YPS_0186 50S ribosomal protein L24 18430 18744 -1
CDS rplN ZP_04456466.1 YPS_0187 50S ribosomal subunit protein L14 18755 19126 -1
CDS rpsQ ZP_04456467.1 YPS_0188 30S ribosomal subunit protein S17 19307 19561 -1
CDS rpmC ZP_04456468.1 YPS_0189 50S ribosomal subunit protein L29 19561 19752 -1
CDS rplP ZP_04456469.1 YPS_0190 50S ribosomal subunit protein L16 19752 20162 -1
CDS rpsC ZP_04456470.1 YPS_0191 30S ribosomal subunit protein S3 20175 20873 -1
CDS rplV ZP_04456471.1 YPS_0192 50S ribosomal subunit protein L22 20891 21223 -1
CDS rpsS ZP_04456472.1 YPS_0193 30S ribosomal subunit protein S19 21238 21516 -1
CDS rplB ZP_04456473.1 YPS_0194 50S ribosomal protein l2 21531 22355 -1
CDS rplW ZP_04456474.1 YPS_0195 50S ribosomal subunit protein L23 22372 22674 -1
CDS rplD ZP_04456475.1 YPS_0196 50S ribosomal subunit protein L4 22671 23276 -1
CDS rplC ZP_04456476.1 YPS_0197 50S ribosomal subunit protein L3 23293 23922 -1
CDS rpsJ ZP_04456477.1 YPS_0198 30S ribosomal subunit protein S10 23955 24266 -1
CDS bfr ZP_04456478.1 YPS_0199 bacterioferritin, iron storage and detoxification protein 24680 25153 -1
CDS bfd ZP_04456479.1 YPS_0200 bacterioferritin-associated ferredoxin 25232 25426 -1
CDS - ZP_04456480.1 YPS_0201 transposase 25614 26123 -1
CDS tufA ZP_04456481.1 YPS_0204 Translation elongation factor Tu 26275 27459 -1
CDS fusA ZP_04456482.1 YPS_0205 protein chain elongation factor EF-G, GTP-binding 27532 29640 -1
CDS rpsG ZP_04456483.1 YPS_0206 30S ribosomal subunit protein S7 29734 30204 -1
CDS rpsL ZP_04456484.1 YPS_0207 30S ribosomal subunit protein S12 30301 30675 -1
CDS yheL ZP_04456485.1 YPS_0208 subunit of the heterohexameric YheLMN (TusBCD) mediator of sulfur relay 30813 31100 -1
CDS yheM ZP_04456486.1 YPS_0209 subunit of the heterohexameric YheLMN (TusBCD) mediator of sulfur relay 31120 31485 -1
CDS yheN ZP_04456487.1 YPS_0210 tRNA 2-thiouridine synthesizing protein, subunit of sulfur transfer complex, TusD 31485 31880 -1
CDS yheO ZP_04456488.1 YPS_0211 predicted DNA-binding transcriptional regulator 31880 32602 -1
CDS fkpA ZP_04456489.1 YPS_0212 FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) 32856 33656 -1
CDS slyX ZP_04456490.1 YPS_0213 conserved protein 33971 34189 1
CDS - ZP_04456491.1 YPS_0214 hypothetical protein 34255 34350 1
CDS slyD ZP_04456492.1 YPS_0215 FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) 34410 34997 -1
CDS yheV ZP_04456493.1 YPS_0216 putative cytoplasmic protein ,probably associated with glutathione-regulated potassium-efflux 35092 35313 -1
CDS kefB ZP_04456494.1 YPS_0217 probable potassium-efflux system protein 35329 37137 -1
CDS kefG ZP_04456495.1 YPS_0218 component of potassium effux complex with KefB 37141 37689 -1
CDS - ZP_04456496.1 YPS_0219 Glutathione-regulated potassium-efflux systemATP-binding protein 37940 39862 1
CDS - ZP_04456497.1 YPS_0220 putative glycosyl transferase 39997 40986 1
CDS - ZP_04456498.1 YPS_0221 putative sugar transferase 41079 41183 1
CDS - ZP_04456499.1 YPS_0222 putative sugar transferase 41197 42045 1
CDS tauD ZP_04456500.1 YPS_0223 putative taurine dioxygenase 42058 42906 -1
CDS tauC ZP_04456501.1 YPS_0224 putative taurine transport system permease protein 42903 43757 -1
CDS tauB ZP_04456502.1 YPS_0225 putative taurine transport ATP-binding protein 43754 44521 -1
CDS tauA ZP_04456503.1 YPS_0226 putative taurine-binding periplasmic protein precursor 44530 45591 -1
CDS - ZP_04456504.1 YPS_0227 hypothetical protein 45482 45601 1
CDS - ZP_04456505.1 YPS_0228 putative ABC-transport protein 45794 46396 -1
CDS yheT ZP_04456506.1 YPS_0229 hydrolase, alpha/beta fold family functionally coupled to phosphoribulokinase 46498 47478 1
CDS yheU ZP_04456507.1 YPS_0230 conserved protein 47475 47711 1
CDS prkB ZP_04456508.1 YPS_0231 predicted phosphoribulokinase 47860 48729 1
CDS - ZP_04456509.1 YPS_0232 putative membrane protein 48907 49338 -1
CDS yhfA ZP_04456510.1 YPS_0233 conserved protein 49410 49817 -1
CDS crp ZP_04456511.1 YPS_0234 cyclic AMP receptor protein 50153 50785 1
CDS - ZP_04456512.1 YPS_0235 putative membrane protein 50871 52238 1
CDS - ZP_04456513.1 YPS_0236 Inner membrane protein 52120 52992 1
CDS - ZP_04456514.1 YPS_0237 putative exported protein 52975 53148 -1
CDS - ZP_04456515.1 YPS_0238 Ornithine aminotransferase; Acetylornithineaminotransferase; N-succinyl-L,L-diaminopimelateaminotransferase 53218 54447 -1
CDS pabA ZP_04456516.1 YPS_0239 aminodeoxychorismate synthase, subunit II 54568 55143 -1
CDS - ZP_04456517.1 YPS_0240 predicted ATPase 55386 56927 -1
CDS ppiA ZP_04456518.1 YPS_0241 peptidyl-prolyl cis-trans isomerase A (rotamase A) 57253 57822 -1
CDS - ZP_04456519.1 YPS_0242 putative glycosyl hydrolase 58338 59651 1
CDS - ZP_04456520.1 YPS_0243 LacI-family transcriptional regulator 59900 60886 1
CDS - ZP_04456521.1 YPS_0244 putative membrane receptor protein 60987 63032 -1
CDS tsgA ZP_04456522.1 YPS_0245 predicted transporter 63518 64702 1
CDS codA ZP_04456523.1 YPS_0246 cytosine deaminase 64787 66085 -1
CDS - ZP_04456524.1 YPS_0247 hypothetical protein 66260 66373 1
CDS nirB ZP_04456525.1 YPS_0248 nitrite reductase 66407 68953 1
CDS nirD ZP_04456526.1 YPS_0249 nitrite reductase [NAD 68950 69276 1
CDS nirC ZP_04456527.1 YPS_0250 putative nitrite transporter 69455 70261 1
CDS - ZP_04456528.1 YPS_0251 siroheme synthase / precorrin-2 oxidase /sirohydrochlorin ferrochelatase / uroporphyrinogen-III methyltransferase 70313 71761 1
CDS trpS ZP_04456529.1 YPS_0252 tryptophan-tRNA ligase 71898 72938 -1
CDS gph ZP_04456530.1 YPS_0253 phosphoglycolate phosphatase 72940 73638 -1
CDS rpe ZP_04456531.1 YPS_0254 D-ribulose-5-phosphate 3-epimerase 73631 74308 -1
CDS dam ZP_04456532.1 YPS_0255 DNA adenine methylase 74611 75426 -1
CDS damX ZP_04456533.1 YPS_0256 membrane protein, interferes with cell division 75510 76499 -1
CDS aroB ZP_04456534.1 YPS_0257 3-dehydroquinate synthase 76753 77841 -1
CDS aroK ZP_04456535.1 YPS_0258 shikimate kinase I 77898 78419 -1
CDS hofQ ZP_04456536.1 YPS_0259 predicted fimbrial transporter 78768 80270 -1