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Yersinia pestis Pestoides A, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
rRNA - - YPS_1392 16S ribosomal RNA 1 838 -1
CDS - ZP_04457636.1 YPS_1393 hypothetical protein 885 1061 1
CDS purH ZP_04457637.1 YPS_1394 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 1529 3118 1
CDS purD ZP_04457638.1 YPS_1395 phosphoribosylamine-glycine ligase 3178 4464 1
CDS yjaH ZP_04457639.1 YPS_1396 conserved protein 4631 5332 -1
CDS hupA ZP_04457640.1 YPS_1397 HU, DNA-binding transcriptional regulator, alpha subunit 5334 5609 -1
CDS - ZP_04457641.1 YPS_1398 hypothetical protein 5619 5723 -1
CDS yjaG ZP_04457642.1 YPS_1399 conserved protein 5798 6388 -1
CDS nfi ZP_04457643.1 YPS_1400 endonuclease V (deoxyinosine 3'endoduclease) 6434 7138 -1
CDS hemE ZP_04457644.1 YPS_1401 uroporphyrinogen decarboxylase 7204 8271 -1
CDS - ZP_04457645.1 YPS_1402 hypothetical protein 8390 9175 -1
CDS nudC ZP_04457646.1 YPS_1403 NADH pyrophosphatase 9268 10050 -1
CDS rsd ZP_04457647.1 YPS_1404 regulator of sigma D 10147 10656 1
CDS thiC ZP_04457648.1 YPS_1405 thiamin (pyrimidine moiety) biosynthesis protein 11032 13077 1
CDS thiE ZP_04457649.1 YPS_1406 thiamin phosphate synthase (thiamin phosphate pyrophosphorylase) 13091 13738 1
CDS thiF ZP_04457650.1 YPS_1407 thiamin (thiazole moiety) biosynthesis protein 13728 14525 1
CDS - ZP_04457651.1 YPS_1408 Sulfur carrier protein ThiS 14465 14737 1
CDS thiG ZP_04457652.1 YPS_1409 thiamin biosynthesis ThiGH complex subunit 14739 15554 1
CDS thiH ZP_04457653.1 YPS_1410 thiamin biosynthesis ThiGH complex subunit 15547 16677 1
CDS rpoC ZP_04457654.1 YPS_1411 RNA polymerase, beta prime subunit 16983 21203 -1
CDS rpoB ZP_04457655.1 YPS_1412 RNA polymerase, beta subunit 21332 25360 -1
CDS rplL ZP_04457656.1 YPS_1413 50S ribosomal subunit protein L7/L12 25703 26071 -1
CDS rplJ ZP_04457657.1 YPS_1414 50S ribosomal subunit protein L10 26138 26635 -1
CDS rplA ZP_04457658.1 YPS_1415 50S ribosomal subunit protein L1 27000 27704 -1
CDS rplK ZP_04457659.1 YPS_1416 50S ribosomal subunit protein L11 27708 28136 -1
CDS nusG ZP_04457660.1 YPS_1417 transcription termination factor 28327 28872 -1
CDS secE ZP_04457661.1 YPS_1418 preprotein translocase membrane subunit 28874 29257 -1
CDS tufA ZP_04457662.1 YPS_1419 Translation elongation factor Tu 29508 30692 -1
tRNA - - YPS_1420 tRNA-Thr 30801 30876 -1
tRNA - - YPS_1421 tRNA-Gly 30883 30957 -1
tRNA - - YPS_1422 tRNA-Tyr 31107 31191 -1
tRNA - - YPS_1423 tRNA-Thr 31210 31285 -1
CDS - ZP_04457663.1 YPS_1424 transposase 31749 32537 -1
CDS - ZP_04457664.1 YPS_1425 transposase 32534 33556 -1
CDS - ZP_04457665.1 YPS_1426 transposase 33613 34125 1
CDS - ZP_04457666.1 YPS_1427 putative sulfatase 34577 36130 -1
CDS - ZP_04457667.1 YPS_1428 hypothetical protein 36559 36687 1
CDS - ZP_04457668.1 YPS_1429 DeoR-family regulatory protein 36970 37746 1
CDS agaZ ZP_04457669.1 YPS_1430 putative tagatose 6-phosphate kinase 37796 39094 1
CDS - ZP_04457670.1 YPS_1431 putative phosphosugar isomerase 39091 40257 1
CDS manX ZP_04457671.1 YPS_1432 putative PTS transport protein 40275 40772 1
CDS - ZP_04457672.1 YPS_1433 putative PTS permease protein 40819 41607 1
CDS - ZP_04457673.1 YPS_1434 putative PTS permease protein 41597 42487 1
CDS - ZP_04457674.1 YPS_1435 putative PTS permease protein 42573 43013 1
CDS - ZP_04457675.1 YPS_1436 putative acetylglucosamine-6-phosphate deacetylase 43016 44182 1
CDS kduD2 ZP_04457676.1 YPS_1437 2-deoxy-D-gluconate 3-dehydrogenase 44378 45133 1
CDS - ZP_04457677.1 YPS_1438 hypothetical protein 45149 46207 1
CDS - ZP_04457678.1 YPS_1439 hypothetical protein 46204 46476 -1
CDS - ZP_04457679.1 YPS_1440 putative regulatory protein 46638 47864 1
CDS - ZP_04457680.1 YPS_1441 putative sulfatase 47885 49492 1
CDS - ZP_04457681.1 YPS_1442 hypothetical protein 49615 51102 1
CDS agaY ZP_04457682.1 YPS_1443 putative aldolase 51212 52066 1
CDS - ZP_04457683.1 YPS_1444 ThiJ/PfpI-family thiamine biogenesis protein 52090 52668 1
CDS - ZP_04457684.1 YPS_1445 LacI-family regulatory protein 52909 53991 -1
CDS - ZP_04457685.1 YPS_1446 putative sugar transporter 54385 55692 1
CDS - ZP_04457686.1 YPS_1447 hypothetical protein 55716 55874 -1
CDS - ZP_04457687.1 YPS_1448 putative glucosidase 55843 58218 1
CDS - ZP_04457688.1 YPS_1449 putative exported protein 58215 58391 -1
CDS - ZP_04457689.1 YPS_1450 hypothetical protein 58355 58471 1
CDS ganR ZP_04457690.1 YPS_1451 gan regulon transcriptional activator 58547 59620 -1
CDS ganL ZP_04457691.1 YPS_1452 galactan outer membrane porin 59892 61151 1
CDS ganC ZP_04457692.1 YPS_1453 putative truncated PTS system EIIBC component 61524 61835 -1
CDS ganB ZP_04457693.1 YPS_1454 beta-galactosidase 61947 64007 -1
CDS ganA ZP_04457694.1 YPS_1455 endo-1,4-beta-galactanase 64058 65260 -1
CDS ganG ZP_04457695.1 YPS_1456 membrane component of an ABC superfamily oligogalactan transporter 65265 66116 -1
CDS - ZP_04457696.1 YPS_1457 Maltose/maltodextrin ABC transporter, permeaseprotein MalF 66128 66967 -1
CDS - ZP_04457697.1 YPS_1458 Maltose/maltodextrin ABC transporter, permeaseprotein MalF 66912 67436 -1
CDS ganE ZP_04457698.1 YPS_1459 periplasmic-binding component of an ABC superfamily oligogalactan transporter 67596 68831 -1
CDS ganK ZP_04457699.1 YPS_1460 ATP-binding component of an ABC superfamily oligogalactan transporter 69194 70300 1
CDS - ZP_04457700.1 YPS_1461 sugar transport ATP-binding protein 70859 72367 1
CDS - ZP_04457701.1 YPS_1462 Ribose ABC transport system, permease protein RbsC 72433 72954 1
CDS - ZP_04457702.1 YPS_1463 Ribose ABC transport system, permease protein RbsC 72869 73444 1
CDS - ZP_04457703.1 YPS_1464 sugar-binding periplasmic protein 73863 74864 1
CDS - ZP_04457704.1 YPS_1465 putative exported protein 75643 76161 1
CDS - ZP_04457705.1 YPS_1466 putative lipoprotein 76537 77394 1
CDS - ZP_04457706.1 YPS_1467 hypothetical protein 77356 77511 -1
CDS - ZP_04457707.1 YPS_1468 hypothetical protein 77602 77709 -1
CDS - ZP_04457708.1 YPS_1469 hypothetical protein 77818 78498 1
CDS - ZP_04457709.1 YPS_1470 hypothetical protein 78498 78818 1
CDS - ZP_04457710.1 YPS_1471 hypothetical protein 78901 79206 -1
CDS - ZP_04457711.1 YPS_1472 putative membrane protein 79423 80202 -1
CDS - ZP_04457712.1 YPS_1473 hypothetical protein 80807 80962 -1
CDS - ZP_04457713.1 YPS_1474 hypothetical protein 81014 81574 -1
CDS - ZP_04457714.1 YPS_1475 hypothetical protein 81544 83856 -1
CDS - ZP_04457715.1 YPS_1476 putative colicin immunity protein 84113 84397 -1
CDS - ZP_04457716.1 YPS_1477 hypothetical protein 84444 84701 -1
CDS - ZP_04457717.1 YPS_1478 hypothetical protein 84754 84852 1
CDS - ZP_04457718.1 YPS_1479 hypothetical protein 84869 84982 1
CDS - ZP_04457719.1 YPS_1480 hypothetical protein 85211 86749 -1
CDS - ZP_04457720.1 YPS_1481 hypothetical protein 87253 88395 -1
CDS - ZP_04457721.1 YPS_1482 hypothetical protein 88622 88750 -1
CDS - ZP_04457722.1 YPS_1483 hypothetical protein 88664 89029 1
CDS - ZP_04457723.1 YPS_1484 hypothetical protein 89042 89278 1
CDS - ZP_04457724.1 YPS_1485 hypothetical protein 89284 89616 1
CDS - ZP_04457725.1 YPS_1486 putative regulatory protein 89798 89998 1
CDS - ZP_04457726.1 YPS_1487 hypothetical protein 90012 90164 -1
CDS - ZP_04457727.1 YPS_1488 hypothetical protein 90157 90483 -1
CDS - ZP_04457728.1 YPS_1489 putative primase 90783 93074 1
CDS - ZP_04457729.1 YPS_1490 hypothetical protein 93474 93872 -1
CDS - ZP_04457730.1 YPS_1491 hypothetical protein 93872 94168 -1