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Yersinia pestis Pestoides A, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_04457838.1 YPS_1603 transposase 52 177 -1
CDS - ZP_04457839.1 YPS_1606 Chondroitinase (chondroitin lyase) 346 3459 -1
CDS - ZP_04457840.1 YPS_1607 putative exported protein 3529 5715 -1
CDS - ZP_04457841.1 YPS_1608 putative exported protein 5830 6780 -1
CDS - ZP_04457842.1 YPS_1609 hypothetical protein 6802 6996 -1
CDS - ZP_04457843.1 YPS_1610 hypothetical protein 7383 7571 -1
CDS - ZP_04457844.1 YPS_1611 hypothetical protein 7784 7891 -1
CDS - ZP_04457845.1 YPS_1612 putative carbonic anhydrase 8067 8822 1
CDS - ZP_04457846.1 YPS_1613 hypothetical protein 9565 9981 1
CDS - ZP_04457847.1 YPS_1614 general secretion pathway protein C 10049 10552 1
CDS - ZP_04457848.1 YPS_1615 general secretion pathway protein D 10633 12555 1
CDS - ZP_04457849.1 YPS_1616 general secretion pathway protein E 12552 14063 1
CDS - ZP_04457850.1 YPS_1617 General secretion pathway protein F / Type IIsecretory pathway, component PulF 14044 15252 1
CDS - ZP_04457851.1 YPS_1618 general secretion pathway protein G 15272 15709 1
CDS - ZP_04457852.1 YPS_1619 general secretion pathway protein H 15714 16256 1
CDS - ZP_04457853.1 YPS_1620 general secretion pathway protein I 16294 16638 1
CDS - ZP_04457854.1 YPS_1621 general secretion pathway protein J 16631 17227 1
CDS - ZP_04457855.1 YPS_1622 general secretion pathway protein K 17236 18192 1
CDS - ZP_04457856.1 YPS_1623 general secretion pathway protein L 18176 19366 1
CDS - ZP_04457857.1 YPS_1624 putative membrane protein 19363 19824 1
CDS - ZP_04457858.1 YPS_1625 prepilin peptidase 19850 20692 1
CDS - ZP_04457859.1 YPS_1626 putative lipoprotein 20676 21041 -1
CDS - ZP_04457860.1 YPS_1627 putative regulatory membrane protein 21325 22041 1
CDS - ZP_04457861.1 YPS_1628 hypothetical protein 22038 22439 1
CDS cheD ZP_04457862.1 YPS_1629 putative methyl-accepting chemotaxis protein 22642 24285 1
CDS - ZP_04457863.1 YPS_1630 hypothetical protein 24271 24906 -1
CDS - ZP_04457864.1 YPS_1631 putative exported protein 25019 25906 -1
CDS - ZP_04457865.1 YPS_1632 LysR-family transcriptional regulatory protein 26013 26921 1
CDS - ZP_04457866.1 YPS_1633 putative sugar transport protein 27290 28450 1
CDS lysR ZP_04457867.1 YPS_1634 DNA-binding transcriptional dual regulator 28447 29388 -1
CDS lysA ZP_04457868.1 YPS_1635 diaminopimelate decarboxylase, PLP-binding 29603 30865 1
CDS galR ZP_04457869.1 YPS_1636 galactose operon repressor 30862 31884 -1
CDS bisC ZP_04457870.1 YPS_1637 putative biotin sulfoxide reductas2 32194 34455 1
CDS aas ZP_04457871.1 YPS_1639 bifunctional 2-acylglycerophospho-ethanolamine acyl transferase/acyl-acyl carrier protein synthetase 34904 37060 1
CDS ygeD ZP_04457872.1 YPS_1640 predicted inner membrane protein 37057 38277 1
CDS - ZP_04457873.1 YPS_1641 hypothetical protein 38306 38539 -1
CDS - ZP_04457874.1 YPS_1642 hypothetical protein 38444 38869 1
CDS - ZP_04457875.1 YPS_1643 hypothetical protein 39124 39249 1
CDS tas ZP_04457876.1 YPS_1644 putative reductase, NAD(P)-linked 39246 40286 -1
CDS mutH ZP_04457877.1 YPS_1645 methyl-directed mismatch repair protein 40658 41344 -1
CDS nudH ZP_04457878.1 YPS_1646 nucleotide hydrolase 42034 42561 1
CDS ptsP ZP_04457879.1 YPS_1647 multifunctional PEP-protein phosphotransferase (enzyme I) and GAF domain containing protein 42574 44820 1
CDS lgt ZP_04457880.1 YPS_1648 phosphatidylglycerol-prolipoprotein diacylglyceryl transferase 45071 45943 1
CDS thyA ZP_04457881.1 YPS_1649 thymidylate synthetase 45950 46744 1
CDS - ZP_04457882.1 YPS_1650 prepilin peptidase dependent protein A precursor 46980 47549 1
CDS - ZP_04457883.1 YPS_1651 putative prepilin peptidase dependent protein 47540 48148 1
CDS - ZP_04457884.1 YPS_1652 putative membrane protein 48145 48615 1
CDS - ZP_04457885.1 YPS_1653 putative prepilin peptidase dependent protein 48603 49013 1
CDS recC ZP_04457886.1 YPS_1654 exonuclease V (RecBCD complex), gamma chain 49148 52519 1
CDS ptr ZP_04457887.1 YPS_1655 protease III 52601 55489 1
CDS recB ZP_04457888.1 YPS_1656 exonuclease V (RecBCD complex), beta subunit 55486 59148 1
CDS recD ZP_04457889.1 YPS_1657 exonuclease V (RecBCD complex), alpha chain 59145 61103 1
CDS argA ZP_04457890.1 YPS_1658 amino acid N-acetyltransferase 61245 62570 -1
CDS amiC ZP_04457891.1 YPS_1659 N-acetylmuramoyl-L-alanine amidase 62806 64056 1
tRNA - - YPS_1660 tRNA-Met 64286 64362 -1
tRNA - - YPS_1661 tRNA-Met 64486 64562 -1
CDS mltA ZP_04457892.1 YPS_1662 membrane-bound lytic murein transglycosylase A 64778 65950 1
CDS ygdL ZP_04457893.1 YPS_1663 conserved protein 66093 66920 1
CDS ygdK ZP_04457894.1 YPS_1664 predicted Fe-S metabolism protein 66956 67399 -1
CDS csdA ZP_04457895.1 YPS_1665 cysteine sulfinate desulfinase 67534 68739 -1
CDS gcvA ZP_04457896.1 YPS_1667 DNA-binding transcriptional dual regulator 69399 70316 1
CDS ygdD ZP_04457897.1 YPS_1668 conserved inner membrane protein 70482 70877 1
CDS ygdE ZP_04457898.1 YPS_1669 putative SAM-dependent methyltransferase 70870 71976 1
CDS - ZP_04457899.1 YPS_1670 DNA polymerase I 72227 72982 -1
CDS ygdH ZP_04457900.1 YPS_1671 conserved protein 73242 74606 -1
CDS queF ZP_04457901.1 YPS_1672 NADPH-dependent 7-cyano-7-deazaguanine reductase 74759 75604 -1
CDS syd ZP_04457902.1 YPS_1673 hypothetical protein 75736 76287 1
CDS - ZP_04457903.1 YPS_1675 transposase 76926 77435 1
CDS yqcC ZP_04457904.1 YPS_1676 conserved protein 77689 78021 1
CDS truC ZP_04457905.1 YPS_1677 tRNA U65 pseudouridine synthase 78021 78794 1
CDS yqcA ZP_04457906.1 YPS_1678 predicted flavoprotein 78822 79271 1
CDS yaeH ZP_04457907.1 YPS_1679 conserved protein 79361 79750 -1
CDS dapD ZP_04457908.1 YPS_1680 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 79874 80698 -1
CDS glnD ZP_04457909.1 YPS_1681 uridylyltransferase/uridylyl-removing enzyme 80873 83554 -1
CDS map ZP_04457910.1 YPS_1682 methionine aminopeptidase 83614 84405 -1
CDS rpsB ZP_04457911.1 YPS_1684 30S ribosomal subunit protein S2 84840 85565 1
CDS tsf ZP_04457912.1 YPS_1685 protein chain elongation factor EF-Ts 85693 86550 1
CDS pyrH ZP_04457913.1 YPS_1686 uridylate kinase 86759 87484 1
CDS frr ZP_04457914.1 YPS_1687 ribosome recycling factor 87620 88177 1
CDS dxr ZP_04457915.1 YPS_1688 1-deoxy-D-xylulose 5-phosphate reductoisomerase 88391 89587 1
CDS ispU ZP_04457916.1 YPS_1689 undecaprenyl pyrophosphate synthetase (di-trans,poly-cis-decaprenylcistransferase) 89811 90569 1
CDS cdsA ZP_04457917.1 YPS_1690 CDP-diglyceride synthase 90579 91427 1
CDS rseP ZP_04457918.1 YPS_1691 inner membrane zinc RIP metalloprotease 91456 92811 1
CDS yaeT ZP_04457919.1 YPS_1692 conserved protein 92848 95235 1
CDS ompH ZP_04457920.1 YPS_1693 periplasmic chaperone 95393 95890 1
CDS lpxD ZP_04457921.1 YPS_1694 UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase 95894 96916 1
CDS fabZ ZP_04457922.1 YPS_1695 (3R)-hydroxymyristol acyl carrier protein dehydratase 97074 97604 1
CDS lpxA ZP_04457923.1 YPS_1696 UDP-N-acetylglucosamine acetyltransferase 97608 98396 1
CDS lpxB ZP_04457924.1 YPS_1697 tetraacyldisaccharide-1-P synthase 98400 99584 1
CDS rnhB ZP_04457925.1 YPS_1698 ribonuclease HII, degrades RNA of DNA-RNA hybrids 99581 100177 1
CDS dnaE ZP_04457926.1 YPS_1699 DNA polymerase III, alpha chain 100340 103822 1
CDS accA ZP_04457927.1 YPS_1700 acetyl-CoA carboxylase, carboxytransferase, alpha subunit 103835 104794 1
CDS yaeR ZP_04457928.1 YPS_1701 predicted lyase 104978 105376 1
CDS tilS ZP_04457929.1 YPS_1702 tRNA(Ile)-lysidine synthetase 105378 106760 1
CDS - ZP_04457930.1 YPS_1703 putative cytochrome 106997 107314 1
CDS rof ZP_04457931.1 YPS_1704 modulator of Rho-dependent transcription termination 107579 107839 -1
CDS - ZP_04457932.1 YPS_1705 hypothetical protein 107826 108026 -1
CDS yaeQ ZP_04457933.1 YPS_1706 conserved protein 108268 108816 1
CDS - ZP_04457934.1 YPS_1707 hypothetical protein YaeJ with similarity to translation release factor 108819 109235 1
CDS cutF ZP_04457935.1 YPS_1708 putative copper homeostasis lipoprotein 109320 110003 1