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Yersinia pestis Pestoides A, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_04511979.1 YPS_4662A Chromosome (plasmid) partitioning protein ParB 1 357 -1
CDS - ZP_04511980.1 YPS_4663 SopA protein 354 1100 -1
CDS - ZP_04511981.1 YPS_4664 SopA protein 1030 1596 -1
CDS - ZP_04511982.1 YPS_4665 hypothetical protein 2070 2183 1
CDS - ZP_04511983.1 YPS_4666 transposase, OrfB 2321 2515 -1
CDS - ZP_04511984.1 YPS_4667 Transposase 2627 3085 -1
CDS - ZP_04511985.1 YPS_4668 Transposase 3109 3426 -1
CDS - ZP_04511986.1 YPS_4669 IncF plasmid conjugative transfer surfaceexclusion protein TraT 3533 4162 -1
CDS - ZP_04511987.1 YPS_4670 TraT complement resistance protein precursor 4170 4283 -1
CDS - ZP_04511988.1 YPS_4671 Transposase 4377 4622 -1
CDS yopK ZP_04511989.1 YPS_4672 secreted (not translocated) targeting protein, possible regulator, Type III system 4760 5308 -1
CDS yopT ZP_04511990.1 YPS_4673 Translocated cysteine protease/Rho GTPase toxin 5808 6776 1
CDS sycT ZP_04511991.1 YPS_4674 putative yopT chaperone 6776 7174 1
CDS - ZP_04511992.1 YPS_4675 hypothetical protein 7218 7607 -1
CDS - ZP_04511993.1 YPS_4676 hypothetical protein 7879 8298 1
CDS - ZP_04511994.1 YPS_4677 hypothetical protein 8243 8386 1
CDS - ZP_04511995.1 YPS_4678 possible transposase 8826 9017 -1
CDS - ZP_04511996.1 YPS_4679 Transposase 9173 9292 1
CDS - ZP_04511997.1 YPS_4680 Transposase 9192 9491 1
CDS yopM ZP_04511998.1 YPS_4681 leucine-rich 15-repeat translocated effector protein 9534 10637 -1
CDS - ZP_04511999.1 YPS_4682 Type III secretion, hypothetical protein 11031 11240 -1
CDS - ZP_04512000.1 YPS_4683 hypothetical protein 11220 11375 1
CDS - ZP_04512001.1 YPS_4684 hypothetical protein 11261 11383 1
CDS - ZP_04512002.1 YPS_4685 Transposase 11409 11732 1
CDS - ZP_04512003.1 YPS_4686 possible transposase 11767 11898 1
CDS yopD ZP_04512004.1 YPS_4687 putative secreted pore/translocation protein 12366 13286 -1
CDS yopB ZP_04512005.1 YPS_4688 putative secreted pore/translocation protein 13305 14510 -1
CDS lcrH ZP_04512006.1 YPS_4689 putative yopB/yopD chaperone 14488 14994 -1
CDS lcrV ZP_04512007.1 YPS_4690 V antigen 15007 15987 -1
CDS lcrG ZP_04512008.1 YPS_4691 putative Yop regulator 15989 16276 -1
CDS lcrR ZP_04512009.1 YPS_4692 hypothetical protein lcrR 16318 16758 -1
CDS lcrD ZP_04512010.1 YPS_4693 putative membrane-bound Yop protein 16755 18869 -1
CDS yscY ZP_04512011.1 YPS_4694 putative type III secretion protein 18856 19200 -1
CDS yscX ZP_04512012.1 YPS_4695 putative type III secretion protein 19197 19565 -1
CDS sycN ZP_04512013.1 YPS_4696 chaperone for YopN 19562 19933 -1
CDS tyeA ZP_04512014.1 YPS_4697 regulator of YopN secretion 19920 20198 -1
CDS yopN ZP_04512015.1 YPS_4698 regulator of Yop secretion, itself secreted 20179 21060 -1
CDS yscN ZP_04512016.1 YPS_4699 ATPase for protein unfolding and Type III secretion 21258 22577 1
CDS yscO ZP_04512017.1 YPS_4700 putative type III secretion protein 22574 23038 1
CDS yscP ZP_04512018.1 YPS_4701 regulator of needle length for Type III secretion 23038 24405 1
CDS yscQ ZP_04512019.1 YPS_4702 putative type III secretion protein 24402 25325 1
CDS yscR ZP_04512020.1 YPS_4703 putative Yop secretion membrane protein 25322 25975 1
CDS yscS ZP_04512021.1 YPS_4704 putative type III secretion protein 25977 26243 1
CDS yscT ZP_04512022.1 YPS_4705 putative type III secretion protein 26240 27025 1
CDS yscU ZP_04512023.1 YPS_4706 putative type III secretion protein 27025 28089 1
CDS virG ZP_04512024.1 YPS_4707 putative Yop targeting lipoprotein 28665 29060 1
CDS lcrF ZP_04512025.1 YPS_4708 putative thermoregulatory protein 29184 29999 1
CDS yscA ZP_04512026.1 YPS_4709 hypothetical protein 30078 30176 1
CDS yscB ZP_04512027.1 YPS_4710 component of negative regulator complex for Yop secretion 30402 30815 1
CDS yscC ZP_04512028.1 YPS_4711 Type III secretion outer membrane pore protein 30821 32644 1
CDS yscD ZP_04512029.1 YPS_4712 putative type III secretion protein 32641 33900 1
CDS yscE ZP_04512030.1 YPS_4713 putative type III secretion protein 33897 34097 1
CDS yscF ZP_04512031.1 YPS_4714 Type III secretion needle protein 34098 34361 1
CDS yscG ZP_04512032.1 YPS_4715 chaperone for YscE 34363 34710 1
CDS yscH ZP_04512033.1 YPS_4716 Type III secreted (not translocated) virulence protein 34707 35204 1
CDS yscI ZP_04512034.1 YPS_4717 putative type III secretion protein 35205 35552 1
CDS yscJ ZP_04512035.1 YPS_4718 putative type III secretion lipoprotein 35559 36293 1
CDS yscK ZP_04512036.1 YPS_4719 putative type III secretion protein 36296 36922 1
CDS yscL ZP_04512037.1 YPS_4720 regulator of YscN ATPase 36901 37533 1
CDS lcrQ ZP_04512038.1 YPS_4721 putative type III secretion regulatory protein 37758 38105 1
CDS - ZP_04512039.1 YPS_4722 putative transposase ORFA 38653 38919 1
CDS - ZP_04512040.1 YPS_4723 putative transposase ORFB 38955 39377 1
CDS - ZP_04512041.1 YPS_4724 putative transposase 39374 39682 1
CDS - ZP_04512042.1 YPS_4725 putative transposase 39794 39973 1
CDS yopH ZP_04512043.1 YPS_4726 translocated protein-tyrosine kinase, inhibitor of phagocytosis 40194 41600 -1
CDS - ZP_04512044.1 YPS_4727 hypothetical protein 41883 42089 -1
CDS - ZP_04512045.1 YPS_4728 Transposase 42050 42697 1
CDS - ZP_04512046.1 YPS_4729 hypothetical protein 42910 43002 -1
CDS - ZP_04512047.1 YPS_4730 Type III secretion injected virulence protein(YopP,YopJ, induces apoptosis, prevents cytokineinduction, inhibits NFkb activation) 43312 44148 -1
CDS - ZP_04512048.1 YPS_4731 hypothetical protein 44054 44185 1
CDS ypkA ZP_04512049.1 YPS_4732 Protein kinase, host Rho GTPase toxin 44544 46742 -1
CDS sycO ZP_04512050.1 YPS_4733 chaperone for YpkA 46750 47199 -1
CDS - ZP_04512051.1 YPS_4734 transposase, OrfB 47495 47797 -1
CDS - ZP_04512052.1 YPS_4735 hypothetical protein 47945 48184 -1
CDS - ZP_04512053.1 YPS_4736 putative replication initiation protein 49357 50223 -1
CDS - ZP_04512054.1 YPS_4738 putative replication transcriptional regulator 50532 50786 -1
CDS - ZP_04512055.1 YPS_4739 Endonuclease 50924 51292 -1
CDS - ZP_04512056.1 YPS_4740 transposase, OrfB 51232 51327 -1
CDS - ZP_04512057.1 YPS_4741 Transposase 51589 51996 -1
CDS - ZP_04512058.1 YPS_4742 Transposase 52020 52337 -1
CDS - ZP_04512059.1 YPS_4743 hypothetical protein 52509 52967 -1
CDS - ZP_04512060.1 YPS_4744 possible transposase 53117 53305 1
CDS - ZP_04512061.1 YPS_4745 Adhesin yadA precursor 53631 54551 -1
CDS - ZP_04512062.1 YPS_4746 hypothetical protein 55540 55920 1
CDS - ZP_04512063.1 YPS_4747 putative transposase 55917 58232 -1
CDS - ZP_04512064.1 YPS_4748 putative resolvase 58396 58947 1
CDS - ZP_04512065.1 YPS_4749 hypothetical protein 58966 59430 1
CDS - ZP_04512066.1 YPS_4750 hypothetical protein 59569 59898 1
CDS - ZP_04512067.1 YPS_4751 putative transposase 59998 60264 1
CDS - ZP_04512068.1 YPS_4752 putative transposase 60342 61097 1
CDS sycH ZP_04512069.1 YPS_4753 putative yopH targeting protein 61245 61670 -1
CDS - ZP_04512070.1 YPS_4754 putative transposase 62014 62445 -1
CDS - ZP_04512071.1 YPS_4755 Transposase 62445 63464 -1
CDS - ZP_04512072.1 YPS_4756 transposase 63591 64373 -1
CDS - ZP_04512073.1 YPS_4757 transposase 64370 65392 -1
CDS - ZP_04512074.1 YPS_4758 Transposase 65406 65576 -1
CDS - ZP_04512075.1 YPS_4759 hypothetical protein 65617 65745 1
CDS - ZP_04512076.1 YPS_4760 Transposase 65709 66323 1
CDS sycE ZP_04512077.1 YPS_4761 putative yopE chaperone 66386 66778 -1
CDS yopE ZP_04512078.1 YPS_4762 Translocated host-GTPase-activating protein 66972 67631 1