xBASE Logo
About | Contact | Home

Yersinia rohdei ATCC 43380, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
tRNA - - yrohd0001_t120 tRNA-Trp 44 119 1
CDS - ZP_04612131.1 yrohd0001_8860 ABC transporter periplasmic-binding protein ytfQ 722 1603 1
CDS - ZP_04612132.1 yrohd0001_8870 Uncharacterized ABC transporter ATP-binding protein 1688 3178 1
CDS - ZP_04612133.1 yrohd0001_8880 Inner membrane ABC transporter permease protein ytfT 3210 4208 1
CDS - ZP_04612134.1 yrohd0001_8900 hypothetical protein 6188 6526 1
CDS - ZP_04612135.1 yrohd0001_8910 hypothetical protein 6624 8147 -1
CDS - ZP_04612136.1 yrohd0001_8920 Acetolactate synthase isozyme 2 large subunit 8716 10362 1
CDS - ZP_04612137.1 yrohd0001_8930 Acetolactate synthase isozyme 2 small subunit 10458 10616 1
CDS - ZP_04612138.1 yrohd0001_8940 Branched-chain-amino-acid aminotransferase 10639 11565 1
CDS - ZP_04612139.1 yrohd0001_8950 Dihydroxy-acid dehydratase 2 11644 13494 1
CDS - ZP_04612140.1 yrohd0001_8960 Threonine dehydratase biosynthetic 13500 15044 1
CDS - ZP_04612141.1 yrohd0001_8970 Transcriptional activator protein 15055 15936 -1
CDS - ZP_04612142.1 yrohd0001_8980 Ketol-acid reductoisomerase 16156 17634 1
CDS - ZP_04612143.1 yrohd0001_8990 hypothetical protein 17865 18596 -1
CDS - ZP_04612144.1 yrohd0001_9000 hypothetical protein 18598 19977 -1
CDS - ZP_04612145.1 yrohd0001_9010 Fimbrial bioproteinsis outer membrane usher protein 19983 22646 -1
CDS - ZP_04612146.1 yrohd0001_9020 Chaperone 22671 23351 -1
CDS - ZP_04612147.1 yrohd0001_9030 hypothetical protein 23563 24093 -1
CDS - ZP_04612148.1 yrohd0001_9040 PpiC-type peptidyl-prolyl cis-trans isomerase 24715 24996 -1
CDS - ZP_04612149.1 yrohd0001_9050 ATP-dependent DNA helicase rep 25223 27244 1
CDS - ZP_04612150.1 yrohd0001_9060 Exo-poly-alpha-D-galacturonosidase 27319 29103 -1
CDS - ZP_04612151.1 yrohd0001_9070 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase 29393 30889 -1
CDS - ZP_04612152.1 yrohd0001_9080 ATP-dependent RNA helicase rhlB 30893 32179 -1
CDS - ZP_04612153.1 yrohd0001_9090 Thioredoxin 1 32298 32624 1
CDS - ZP_04612154.1 yrohd0001_9100 Transcription termination factor rho 33087 34346 1
CDS - ZP_04612155.1 yrohd0001_9110 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase 34652 35749 1
CDS - ZP_04612156.1 yrohd0001_9120 Lipopolysaccharide biosynthesis protein wzzE 35827 36846 1
CDS - ZP_04612157.1 yrohd0001_9130 UDP-N-acetylglucosamine 2-epimerase 36940 38070 1
CDS - ZP_04612158.1 yrohd0001_9140 NDP-N-acetyl-D-galactosaminuronic acid dehydrogenase 38151 39329 1
CDS - ZP_04612159.1 yrohd0001_9150 dTDP-glucose 4,6-dehydratase 39374 40393 1
CDS - ZP_04612160.1 yrohd0001_9160 hypothetical protein 40418 40555 1
CDS - ZP_04612161.1 yrohd0001_9170 Glucose-1-phosphate thymidylyltransferase 40619 41500 1
CDS - ZP_04612162.1 yrohd0001_9180 Lipopolysaccharide biosynthesis protein 41589 42209 1
CDS - ZP_04612163.1 yrohd0001_9190 Lipopolysaccharide biosynthesis protein rffA 42211 43341 1
CDS - ZP_04612164.1 yrohd0001_9200 hypothetical protein 43343 44599 1
CDS - ZP_04612165.1 yrohd0001_9210 4-alpha-L-fucosyltransferase 44622 45707 1
CDS - ZP_04612166.1 yrohd0001_9220 ECA polymerase 45746 47080 1
CDS - ZP_04612167.1 yrohd0001_9230 UDP-N-acetyl-D-mannosaminuronic acid transferase 47089 47865 1
CDS - ZP_04612168.1 yrohd0001_9240 hypothetical protein 48291 49682 1
CDS - ZP_04612169.1 yrohd0001_9250 hypothetical protein 49688 49801 1
tRNA - - yrohd0001_t130 tRNA-Arg 49910 49986 1
tRNA - - yrohd0001_t140 tRNA-His 50063 50138 1
tRNA - - yrohd0001_t150 tRNA-Leu 50154 50240 1
tRNA - - yrohd0001_t160 tRNA-Pro 50316 50392 1
CDS - ZP_04612170.1 yrohd0001_9260 hypothetical protein 50653 50769 -1
CDS - ZP_04612171.1 yrohd0001_9270 hypothetical protein 51408 52607 -1
CDS - ZP_04612172.1 yrohd0001_9280 uroporphyrinogen-III C-methyltransferase 52610 53743 -1
CDS - ZP_04612173.1 yrohd0001_9290 Uroporphyrinogen-III synthase 53764 54387 -1
CDS - ZP_04612174.1 yrohd0001_9300 Porphobilinogen deaminase 54510 55451 -1
CDS - ZP_04612175.1 yrohd0001_9310 hypothetical protein 55492 55665 -1
CDS - ZP_04612176.1 yrohd0001_9320 Adenylate cyclase 55782 58328 1
CDS - ZP_04612177.1 yrohd0001_9330 Pentapeptide repeat protein 58439 59887 -1
CDS - ZP_04612178.1 yrohd0001_9340 hypothetical protein 60075 60395 -1
CDS - ZP_04612179.1 yrohd0001_9350 hypothetical protein 60529 60717 1
CDS - ZP_04612180.1 yrohd0001_9360 Diaminopimelate epimerase 60844 61629 1
CDS - ZP_04612181.1 yrohd0001_9370 hypothetical protein 61640 62344 1
CDS - ZP_04612182.1 yrohd0001_9380 Tyrosine recombinase 62461 63252 1
CDS - ZP_04612183.1 yrohd0001_9400 DNA helicase II 64069 66231 1
CDS - ZP_04612184.1 yrohd0001_9410 TetR-family regulatory protein 66382 67026 -1
CDS - ZP_04612185.1 yrohd0001_9420 hypothetical protein 67283 68506 1
CDS - ZP_04612186.1 yrohd0001_9430 hypothetical protein 68634 69476 1
CDS - ZP_04612187.1 yrohd0001_9440 hypothetical protein 69626 70099 -1
CDS - ZP_04612188.1 yrohd0001_9450 Magnesium transport protein corA 70589 71539 1
CDS - ZP_04612189.1 yrohd0001_9460 Uncharacterized transporter 71755 72645 -1
CDS - ZP_04612190.1 yrohd0001_9470 hypothetical protein 72725 73195 -1
CDS - ZP_04612191.1 yrohd0001_9480 Phospholipase A1 73399 74268 1
CDS - ZP_04612192.1 yrohd0001_9490 ATP-dependent DNA helicase recQ 74345 76177 1
CDS - ZP_04612193.1 yrohd0001_9500 Threonine efflux protein 76209 76829 1
CDS - ZP_04612194.1 yrohd0001_9510 Homoserine/homoserine lactone efflux protein 76889 77509 -1
CDS - ZP_04612195.1 yrohd0001_9520 Lysophospholipase L2 77617 78630 1
CDS - ZP_04612196.1 yrohd0001_9530 hypothetical protein 78665 79474 1
CDS - ZP_04612197.1 yrohd0001_9540 Glycerophosphoryl diester phosphodiesterase 79556 80680 -1
CDS - ZP_04612198.1 yrohd0001_9550 Glycerol-3-phosphate transporter 80845 82200 -1
CDS - ZP_04612199.1 yrohd0001_9560 Anaerobic glycerol-3-phosphate dehydrogenase subunit A 82577 84232 1
CDS - ZP_04612200.1 yrohd0001_9570 Anaerobic glycerol-3-phosphate dehydrogenase subunit B 84234 85496 1
CDS - ZP_04612201.1 yrohd0001_9580 hypothetical protein 85535 86755 1
CDS - ZP_04612202.1 yrohd0001_9590 hypothetical protein 86902 87426 -1
CDS - ZP_04612203.1 yrohd0001_9600 hypothetical protein 87487 88167 -1
CDS - ZP_04612204.1 yrohd0001_9610 Sulfurtransferase tusA 88474 88728 1
CDS - ZP_04612205.1 yrohd0001_9620 Lead, cadmium, zinc and mercury-transporting ATPase 88751 91078 -1
CDS - ZP_04612206.1 yrohd0001_9630 Uncharacterized membrane protein yhhN 91315 91941 -1
CDS - ZP_04612207.1 yrohd0001_9640 hypothetical protein 92230 92550 1
CDS - ZP_04612208.1 yrohd0001_9650 hypothetical protein 92583 92972 1
CDS - ZP_04612209.1 yrohd0001_9660 hypothetical protein 93033 93278 -1
CDS - ZP_04612210.1 yrohd0001_9670 Ribosomal RNA small subunit methyltransferase D 93295 93948 -1
CDS - ZP_04612211.1 yrohd0001_9680 Cell division protein ftsY 94167 95834 1
CDS - ZP_04612212.1 yrohd0001_9690 Cell division ATP-binding protein 95840 96508 1
CDS - ZP_04612213.1 yrohd0001_9700 Cell division protein ftsX 96591 97451 1
CDS - ZP_04612214.1 yrohd0001_9710 RNA polymerase sigma-32 factor 97731 98588 1
CDS - ZP_04612215.1 yrohd0001_9720 Acetyltransferase 98690 99082 -1
CDS - ZP_04612216.1 yrohd0001_9730 hypothetical protein 99321 99458 1
CDS - ZP_04612217.1 yrohd0001_9740 hypothetical protein 99505 100620 1
CDS - ZP_04612218.1 yrohd0001_9750 High-affinity branched-chain amino acid transport system permease protein livH 100785 101711 1
CDS - ZP_04612219.1 yrohd0001_9760 High-affinity branched-chain amino acid transport system permease protein 101777 102994 1
CDS - ZP_04612220.1 yrohd0001_9770 High-affinity branched-chain amino acid transport ATP-binding protein livG 103006 103758 1
CDS - ZP_04612221.1 yrohd0001_9780 High-affinity branched-chain amino acid transport ATP-binding protein braG 103784 104485 1
CDS - ZP_04612222.1 yrohd0001_9790 hypothetical protein 104552 105655 -1
CDS - ZP_04612223.1 yrohd0001_9800 hypothetical protein 105676 105900 -1
CDS - ZP_04612224.1 yrohd0001_9810 hypothetical protein 106216 106788 -1
CDS - ZP_04612225.1 yrohd0001_9820 hypothetical protein 106835 107515 -1