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Yersinia rohdei ATCC 43380, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_04612259.1 yrohd0001_10170 Molybdopterin-guanine dinucleotide biosynthesis protein B 232 675 -1
CDS - ZP_04612260.1 yrohd0001_10180 Molybdopterin-guanine dinucleotide biosynthesis protein A 756 1250 -1
CDS - ZP_04612261.1 yrohd0001_10190 hypothetical protein 1500 1769 1
CDS - ZP_04612262.1 yrohd0001_10200 hypothetical protein 1861 2847 1
CDS - ZP_04612263.1 yrohd0001_10210 Thiol:disulfide interchange protein dsbA 2905 3498 1
CDS - ZP_04612264.1 yrohd0001_10220 hypothetical protein 3822 3959 -1
CDS - ZP_04612265.1 yrohd0001_10230 DNA polymerase I 4090 6888 1
CDS - ZP_04612266.1 yrohd0001_10240 GTP-binding protein engB 7226 7849 -1
CDS - ZP_04612267.1 yrohd0001_10250 hypothetical protein 7963 8079 1
CDS - ZP_04612268.1 yrohd0001_10260 hypothetical protein 8662 9228 1
CDS - ZP_04612269.1 yrohd0001_10270 Oxygen-independent coproporphyrinogen III oxidase 9405 10784 1
CDS - ZP_04612270.1 yrohd0001_10280 Nitrogen regulation protein NR(I) 10846 12258 -1
CDS - ZP_04612271.1 yrohd0001_10290 Nitrogen regulation protein ntrB 12266 13318 -1
CDS - ZP_04612272.1 yrohd0001_10300 Glutamine synthetase 13538 14947 -1
CDS - ZP_04612273.1 yrohd0001_10310 GTP-binding protein typA/bipA 15463 17286 1
CDS - ZP_04612274.1 yrohd0001_10320 Phosphatase yihX 17614 18201 1
CDS - ZP_04612275.1 yrohd0001_10330 tRNA-processing ribonuclease BN 18350 19171 1
CDS - ZP_04612276.1 yrohd0001_10340 D-tyrosyl-tRNA(Tyr) deacylase 19178 19615 1
CDS - ZP_04612277.1 yrohd0001_10350 hypothetical protein 19688 20611 1
CDS - ZP_04612278.1 yrohd0001_10360 LuxR family transcription regulatory protein 21390 22076 1
CDS - ZP_04612279.1 yrohd0001_10370 LuxR family transcription regulatory protein 22089 22775 1
CDS - ZP_04612280.1 yrohd0001_10380 hypothetical protein 22878 24602 -1
CDS - ZP_04612281.1 yrohd0001_10390 purine permease yicE 24733 26118 -1
CDS - ZP_04612282.1 yrohd0001_10400 Glutamate:Na+ symporter, ESS family 26357 27571 1
CDS - ZP_04612283.1 yrohd0001_10410 ATP-dependent DNA helicase recG 27720 29801 -1
CDS - ZP_04612284.1 yrohd0001_10420 tRNA guanosine-2'-O-methyltransferase 29802 30494 -1
CDS - ZP_04612285.1 yrohd0001_10430 Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 30500 32602 -1
CDS - ZP_04612286.1 yrohd0001_10440 DNA-directed RNA polymerase subunit omega 32621 32896 -1
CDS - ZP_04612287.1 yrohd0001_10450 Guanylate kinase 32951 33574 -1
CDS - ZP_04612288.1 yrohd0001_10460 DNA ligase B 33987 35678 1
CDS - ZP_04612289.1 yrohd0001_10470 hypothetical protein 35695 36312 -1
CDS - ZP_04612290.1 yrohd0001_10480 Nucleoside permease nupC 36575 36730 -1
CDS - ZP_04612291.1 yrohd0001_10490 Enoyl-CoA hydratase/isomerase family protein 37075 37941 1
CDS - ZP_04612292.1 yrohd0001_10500 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) 37952 39946 -1
CDS - ZP_04612293.1 yrohd0001_10510 YicC N-terminal domain protein 40706 41569 -1
CDS - ZP_04612294.1 yrohd0001_10520 Ribonuclease PH 41695 42411 1
CDS - ZP_04612295.1 yrohd0001_10530 Orotate phosphoribosyltransferase 42573 43214 1
CDS - ZP_04612296.1 yrohd0001_10540 HTH-type protein slmA 43409 44005 -1
CDS - ZP_04612297.1 yrohd0001_10550 Deoxyuridine 5'-triphosphate nucleotidohydrolase 44126 44494 -1
CDS - ZP_04612298.1 yrohd0001_10560 Phosphopantothenate--cysteine ligase 44562 45779 -1
CDS - ZP_04612299.1 yrohd0001_10570 DNA repair protein radC 45934 46641 1
CDS - ZP_04612300.1 yrohd0001_10580 50S ribosomal protein L28 46968 47141 1
CDS - ZP_04612301.1 yrohd0001_10590 Formamidopyrimidine-DNA glycosylase 47407 48216 1
CDS - ZP_04612302.1 yrohd0001_10600 Phosphopantetheine adenylyltransferase 48219 48647 -1
CDS - ZP_04612303.1 yrohd0001_10610 Lipopolysaccharide core biosynthesis glycosyltransferase waaE 48698 49480 -1
CDS - ZP_04612304.1 yrohd0001_10620 hypothetical protein 49481 50758 -1
CDS - ZP_04612305.1 yrohd0001_10640 ADP-heptose--LPS heptosyltransferase 2 52266 53348 -1
CDS - ZP_04612306.1 yrohd0001_10650 ADP-L-glycero-D-manno-heptose-6-epimerase 53379 54320 -1
CDS - ZP_04612307.1 yrohd0001_10660 2-amino-3-ketobutyrate CoA ligase 54554 55768 1
CDS - ZP_04612308.1 yrohd0001_10670 L-threonine 3-dehydrogenase 55777 56802 1
CDS - ZP_04612309.1 yrohd0001_10680 hypothetical protein 56919 57944 -1
CDS - ZP_04612310.1 yrohd0001_10690 hypothetical protein 57967 59307 -1
CDS - ZP_04612311.1 yrohd0001_10700 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 59347 60894 -1
CDS - ZP_04612312.1 yrohd0001_10710 hypothetical protein 61215 61649 1
CDS - ZP_04612313.1 yrohd0001_10720 Glutaredoxin-3 61703 61951 1
CDS - ZP_04612314.1 yrohd0001_10740 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 62512 63531 1
CDS - ZP_04612315.1 yrohd0001_10750 Serine acetyltransferase 63665 64486 1
CDS - ZP_04612316.1 yrohd0001_10760 Methyltransferase 64613 65131 -1
CDS - ZP_04612317.1 yrohd0001_10770 Transcriptional regulator, AraC family 65297 66424 1
CDS - ZP_04612318.1 yrohd0001_10780 hypothetical protein 66472 67785 -1
CDS - ZP_04612319.1 yrohd0001_10790 Transcriptional regulator in 2-component system 67845 68639 -1
CDS - ZP_04612320.1 yrohd0001_10800 Periplasmic repressor of cpx regulon by interaction with CpxA, rescue from transitory stresses 68729 69226 1
CDS - ZP_04612321.1 yrohd0001_10810 Int 69409 69624 -1
CDS - ZP_04612322.1 yrohd0001_10820 Replication protein A protein 69681 69884 1
CDS - ZP_04612323.1 yrohd0001_10830 hypothetical protein 69973 70701 1
CDS - ZP_04612324.1 yrohd0001_10840 Phage protein q 70847 71002 1
CDS - ZP_04612325.1 yrohd0001_10850 hypothetical protein 71012 71188 1
CDS - ZP_04612326.1 yrohd0001_10860 Gp25 71194 71334 1
CDS - ZP_04612327.1 yrohd0001_10870 Ferrous-iron efflux pump fieF 71376 72278 1
CDS - ZP_04612328.1 yrohd0001_10880 6-phosphofructokinase isozyme 1 72511 73494 1
CDS - ZP_04612329.1 yrohd0001_10890 hypothetical protein 73809 74798 1
CDS - ZP_04612330.1 yrohd0001_10900 hypothetical protein 74984 75790 1
CDS - ZP_04612331.1 yrohd0001_10910 Triosephosphate isomerase 75845 76612 -1
CDS - ZP_04612332.1 yrohd0001_10920 hypothetical protein 76741 77346 -1
CDS - ZP_04612333.1 yrohd0001_10930 hypothetical protein 77397 77942 1
CDS - ZP_04612334.1 yrohd0001_10940 Ferredoxin--NADP reductase 78005 78751 -1
CDS - ZP_04612335.1 yrohd0001_10950 Multidrug resistance protein D 79161 80312 1
CDS - ZP_04612336.1 yrohd0001_10960 Fructose-1,6-bisphosphatase class 2 80377 81387 -1
CDS - ZP_04612337.1 yrohd0001_10970 Glycerol kinase 81569 83092 -1
CDS - ZP_04612338.1 yrohd0001_10980 Propanediol diffusion facilitator 83136 83984 -1
CDS - ZP_04612339.1 yrohd0001_10990 Cell division protein zapB 84666 84905 1
CDS - ZP_04612340.1 yrohd0001_11000 Regulator of ribonuclease activity A protein 2 85071 85556 -1
CDS - ZP_04612341.1 yrohd0001_11010 1,4-dihydroxy-2-naphthoate octaprenyltransferase 85687 86616 -1
CDS - ZP_04612342.1 yrohd0001_11020 ATP-dependent hsl protease ATP-binding subunit hslU 86818 88149 -1
CDS - ZP_04612343.1 yrohd0001_11030 ATP-dependent protease hslV 88186 88710 -1
CDS - ZP_04612344.1 yrohd0001_11040 Cell division protein FtsN 88811 89689 -1
CDS - ZP_04612345.1 yrohd0001_11050 HTH-type transcriptional repressor cytR 89755 90759 -1
CDS - ZP_04612346.1 yrohd0001_11060 hypothetical protein 90843 90962 -1
CDS - ZP_04612347.1 yrohd0001_11070 Primosomal protein N' 91403 93601 -1
CDS - ZP_04612348.1 yrohd0001_11080 50S ribosomal protein L31 93814 94089 1
CDS - ZP_04612349.1 yrohd0001_11090 Secreted effector protein 94153 94536 -1
CDS - ZP_04612350.1 yrohd0001_11100 Met repressor 94690 95007 -1
CDS - ZP_04612351.1 yrohd0001_11110 Cystathionine gamma-synthase 95353 96525 1
CDS - ZP_04612352.1 yrohd0001_11120 Homoserine dehydrogenase 96528 98963 1
CDS - ZP_04612353.1 yrohd0001_11130 5,10-methylenetetrahydrofolate reductase 99268 100152 1
CDS - ZP_04612354.1 yrohd0001_11140 Alpha-ketoglutarate permease 100539 101876 1
CDS - ZP_04612355.1 yrohd0001_11150 Phosphoenolpyruvate carboxylase 102201 104837 -1
CDS - ZP_04612356.1 yrohd0001_11160 hypothetical protein 105028 105159 1
CDS - ZP_04612357.1 yrohd0001_11170 Acetylornithine deacetylase 105185 106333 -1
CDS - ZP_04612358.1 yrohd0001_11180 N-acetyl-gamma-glutamyl-phosphate reductase 106569 107573 1