xBASE Logo
About | Contact | Home

Yersinia rohdei ATCC 43380, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_04612375.1 yrohd0001_16300 hypothetical protein 22 1011 -1
CDS - ZP_04612376.1 yrohd0001_16310 Methyl-accepting chemotaxis protein 1251 2969 -1
CDS - ZP_04612377.1 yrohd0001_16320 hypothetical protein 3355 3471 -1
CDS - ZP_04612378.1 yrohd0001_16330 Periplasmic binding protein 3646 4689 1
CDS - ZP_04612379.1 yrohd0001_16340 Ferric enterobactin transport protein 4871 5938 1
CDS - ZP_04612380.1 yrohd0001_16350 Ferric enterobactin transport system permease protein fepG 6010 6978 1
CDS - ZP_04612381.1 yrohd0001_16360 ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component 7122 7772 1
CDS - ZP_04612382.1 yrohd0001_16370 Enterochelin esterase 7813 9165 -1
CDS - ZP_04612383.1 yrohd0001_16380 hypothetical protein 9276 9464 -1
CDS - ZP_04612384.1 yrohd0001_16390 hypothetical protein 9587 10018 1
CDS - ZP_04612385.1 yrohd0001_16400 hypothetical protein 10094 10483 1
CDS - ZP_04612386.1 yrohd0001_16410 Outer membrane efflux protein 10496 11794 1
CDS - ZP_04612387.1 yrohd0001_16420 Efflux transporter, RND family, MFP subunit 11815 13323 1
CDS - ZP_04612388.1 yrohd0001_16430 Heavy metal efflux pump, CzcA family 13365 16448 1
CDS - ZP_04612389.1 yrohd0001_16440 hypothetical protein 17161 17760 1
CDS - ZP_04612390.1 yrohd0001_16450 hypothetical protein 17968 18168 1
CDS - ZP_04612391.1 yrohd0001_16460 hypothetical protein 18265 18687 1
CDS - ZP_04612392.1 yrohd0001_16470 tight adherance operon protein 18791 19567 1
CDS - ZP_04612393.1 yrohd0001_16480 Type II/III secretion system protein 19729 20679 1
CDS - ZP_04612394.1 yrohd0001_16490 Type II/III secretion system protein 20735 20884 1
CDS - ZP_04612395.1 yrohd0001_16500 hypothetical protein 20908 21162 1
CDS - ZP_04612396.1 yrohd0001_16510 hypothetical protein 21279 22286 1
CDS - ZP_04612397.1 yrohd0001_16520 Type II secretion protein 22290 23576 1
CDS - ZP_04612398.1 yrohd0001_16530 Type II secretion system protein F domain protein 23636 24454 1
CDS - ZP_04612399.1 yrohd0001_16540 Type II secretion system protein 24490 25287 1
CDS - ZP_04612400.1 yrohd0001_16550 hypothetical protein 25349 26026 1
CDS - ZP_04612401.1 yrohd0001_16560 tight adherance operon protein 26366 27049 1
CDS - ZP_04612402.1 yrohd0001_16570 hypothetical protein 27096 28658 1
CDS - ZP_04612403.1 yrohd0001_16580 Biopolymer transport ExbD protein 28702 29121 -1
CDS - ZP_04612404.1 yrohd0001_16590 TonB complex protein 29131 30141 -1
CDS - ZP_04612405.1 yrohd0001_16600 Cystathionine beta-lyase 30622 31827 1
CDS - ZP_04612406.1 yrohd0001_16610 DedA-family membrane protein 32080 32742 1
CDS - ZP_04612407.1 yrohd0001_16620 Uncharacterized HTH-type transcriptional regulator yqhC 32793 33686 -1
CDS - ZP_04612408.1 yrohd0001_16630 Alcohol dehydrogenase yqhD 33868 35025 1
CDS - ZP_04612409.1 yrohd0001_16640 2,5-diketo-D-gluconic acid reductase A 35190 36023 1
CDS - ZP_04612410.1 yrohd0001_16650 hypothetical protein 36035 38335 -1
CDS - ZP_04612411.1 yrohd0001_16660 hypothetical protein 38775 40202 -1
CDS - ZP_04612412.1 yrohd0001_16670 hypothetical protein 40336 40452 -1
CDS - ZP_04612413.1 yrohd0001_16680 1-acyl-sn-glycerol-3-phosphate acyltransferase 40541 41233 -1
CDS - ZP_04612414.1 yrohd0001_16690 DNA topoisomerase 4 subunit A 41451 43724 -1
CDS - ZP_04612415.1 yrohd0001_16700 hypothetical protein 43953 44075 1
CDS - ZP_04612416.1 yrohd0001_16710 hypothetical protein 44080 44646 1
CDS - ZP_04612417.1 yrohd0001_16720 Antibiotic biosynthesis monooxygenase 44686 44994 1
CDS - ZP_04612418.1 yrohd0001_16730 Transcriptional regulator 45031 45933 -1
CDS - ZP_04612419.1 yrohd0001_16740 DNA topoisomerase 4 subunit B 45937 47832 -1
CDS - ZP_04612420.1 yrohd0001_16750 hypothetical protein 47963 48442 -1
CDS - ZP_04612421.1 yrohd0001_16760 hypothetical protein 48544 49371 -1
CDS - ZP_04612422.1 yrohd0001_16770 hypothetical protein 49452 49877 -1
CDS - ZP_04612423.1 yrohd0001_16780 ADP-ribose pyrophosphatase 49893 50525 -1
CDS - ZP_04612424.1 yrohd0001_16790 hypothetical protein 50687 50941 -1
CDS - ZP_04612425.1 yrohd0001_16800 hypothetical protein 50992 51114 -1
CDS - ZP_04612426.1 yrohd0001_16810 Outer membrane protein tolC 51129 52610 1
CDS - ZP_04612427.1 yrohd0001_16820 hypothetical protein 52859 53548 1
CDS - ZP_04612428.1 yrohd0001_16830 Glutathionylspermidine synthase 53634 54719 1
CDS - ZP_04612429.1 yrohd0001_16840 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B 54913 55680 -1
CDS - ZP_04612430.1 yrohd0001_16850 3,4-dihydroxy-2-butanone 4-phosphate synthase 55985 56638 -1
CDS - ZP_04612431.1 yrohd0001_16860 hypothetical protein 57078 57359 1
CDS - ZP_04612432.1 yrohd0001_16870 Inner membrane protein yjeH 57420 58667 -1
CDS - ZP_04612433.1 yrohd0001_16880 D-beta-D-heptose 1-phosphate adenosyltransferase 58850 60280 -1
CDS - ZP_04612434.1 yrohd0001_16890 Glutamate-ammonia-ligase adenylyltransferase 60407 61156 -1
CDS - ZP_04612435.1 yrohd0001_16900 Glutamate-ammonia-ligase adenylyltransferase 61204 63258 -1
CDS - ZP_04612436.1 yrohd0001_16910 hypothetical protein 63270 64607 -1
CDS - ZP_04612437.1 yrohd0001_16920 hypothetical protein 64898 65518 1
CDS - ZP_04612439.1 yrohd0001_16930 Predicted Dehydrogenase and protein 65822 65953 -1
CDS - ZP_04612438.1 yrohd0001_16940 Phosphatase 65952 67190 1
CDS - ZP_04612440.1 yrohd0001_16950 Undecaprenyl-diphosphatase 67399 68217 -1
CDS - ZP_04612441.1 yrohd0001_16960 Dihydroneopterin aldolase 68444 68803 -1
CDS - ZP_04612442.1 yrohd0001_16970 hypothetical protein 68821 69561 1
CDS - ZP_04612443.1 yrohd0001_16980 O-sialoglycoprotein endopeptidase 69703 70728 -1
CDS - ZP_04612444.1 yrohd0001_17000 30S ribosomal protein S21 71090 71305 1
CDS - ZP_04612445.1 yrohd0001_17010 DNA primase 71442 73190 1
CDS - ZP_04612446.1 yrohd0001_17020 hypothetical protein 73204 73317 -1
CDS - ZP_04612447.1 yrohd0001_17030 RNA polymerase sigma factor rpoD 73349 75187 1
tRNA - - yrohd0001_t170 tRNA-Met 75400 75476 1
CDS - ZP_04612448.1 yrohd0001_17040 hypothetical protein 75591 76424 -1
CDS - ZP_04612449.1 yrohd0001_17050 hypothetical protein 76538 76831 -1
CDS - ZP_04612450.1 yrohd0001_17060 hypothetical protein 76925 77263 -1
CDS - ZP_04612451.1 yrohd0001_17070 radC-like protein yeeS 77274 77753 -1
CDS - ZP_04612452.1 yrohd0001_17080 hypothetical protein 77765 77893 -1
CDS - ZP_04612453.1 yrohd0001_17090 hypothetical protein 78888 80318 1
CDS - ZP_04612454.1 yrohd0001_17100 hypothetical protein 80721 81896 1
CDS - ZP_04612455.1 yrohd0001_17110 hypothetical protein 82076 83140 1
CDS - ZP_04612456.1 yrohd0001_17120 ThiF family protein 83142 84905 1
CDS - ZP_04612457.1 yrohd0001_17130 Exonuclease RNase T and DNA polymerase III 85413 85955 -1
CDS - ZP_04612458.1 yrohd0001_17140 hypothetical protein 86437 86826 -1
CDS - ZP_04612459.1 yrohd0001_17150 hypothetical protein 86898 87278 -1
CDS - ZP_04612460.1 yrohd0001_17160 hypothetical protein 87402 87938 -1
CDS - ZP_04612461.1 yrohd0001_17170 Uncharacterized HTH-type transcriptional regulator yfjR 87982 88692 -1
CDS - ZP_04612462.1 yrohd0001_17180 hypothetical protein 88936 89754 -1
CDS - ZP_04612463.1 yrohd0001_17190 Predicted GTPase 89842 90705 -1
CDS - ZP_04612464.1 yrohd0001_17210 Helicase domain protein 92043 95321 1
CDS - ZP_04612465.1 yrohd0001_17220 hypothetical protein 95462 96019 1
CDS - ZP_04612466.1 yrohd0001_17230 hypothetical protein 96342 98717 1
CDS - ZP_04612467.1 yrohd0001_17240 Site-specific DNA-methyltransferase (Adenine-specific) 98793 100670 1
CDS - ZP_04612468.1 yrohd0001_17250 Type III restriction-modification system restriction subunit 100682 103753 1
CDS - ZP_04612469.1 yrohd0001_17260 hypothetical protein 104169 105509 1
CDS - ZP_04612470.1 yrohd0001_17270 hypothetical protein 105520 107394 1
CDS - ZP_04612471.1 yrohd0001_17280 Glycosyltransferase family 9 protein 107577 109151 1
CDS - ZP_04612472.1 yrohd0001_17290 hypothetical protein 109894 110949 -1
CDS - ZP_04612473.1 yrohd0001_17300 Polymerase and histidinol phosphatase family protein 111036 111794 -1